RNA–Protein interactions for RNA: ENST00000435149.1

NCSTN-206, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 824 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-206ENST00000435149 CUL4BQ13620 913 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 PSMD6Q15008 389 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 MAPRE1Q15691 268 aaKnown RBP8.55□□□□□ -1.04
NCSTN-206ENST00000435149 KNOP1Q1ED39 458 aaKnown RBP8.55□□□□□ -1.04
NCSTN-206ENST00000435149 BMT2Q1RMZ1 405 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 SOWAHAQ2M3V2 549 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 LACTB2Q53H82 288 aaPredicted RBP8.55□□□□□ -1.04
NCSTN-206ENST00000435149 INTS6LQ5JSJ4 861 aaKnown RBP8.55□□□□□ -1.04
NCSTN-206ENST00000435149 C4orf50Q6ZRC1 276 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 TMEM25Q86YD3 366 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 SPATA2LQ8IUW3 424 aaPredicted RBP8.55□□□□□ -1.04
NCSTN-206ENST00000435149 OR5B17Q8NGF7 314 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 OR4C6Q8NH72 309 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 CCDC127Q96BQ5 260 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 FUBP3Q96I24 572 aaKnown RBP eCLIP8.55□□□□□ -1.04
NCSTN-206ENST00000435149 FAM84AQ96KN4 292 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 CGRRF1Q99675 332 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 SLC12A9Q9BXP2 914 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 SLC39A2Q9NP94 309 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 AASDHPPTQ9NRN7 309 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 ENTPD4Q9Y227 616 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 PLXNA2O75051 1894 aa8.55□□□□□ -1.04
NCSTN-206ENST00000435149 COL27A1Q8IZC6 1860 aaPredicted RBP8.55□□□□□ -1.04
NCSTN-206ENST00000435149 PTPRJQ12913 1337 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 CCDC187A0A096LP49 1063 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 PRR19A6NJB7 356 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 GABRDO14764 452 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 NPC1O15118 1278 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 CLIC2O15247 247 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 EXOC3O60645 756 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 SDC3O75056 442 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 CLSTN1O94985 981 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 OLFM2O95897 454 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 PFKFB1P16118 471 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 CYP2F1P24903 491 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 TNNC1P63316 161 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 TRPC3Q13507 836 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 ENPP2Q13822 863 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 CFAP221Q4G0U5 840 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 KIAA0895LQ68EN5 471 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 RBM44Q6ZP01 1051 aaKnown RBP8.54□□□□□ -1.04
NCSTN-206ENST00000435149 TRAPPC11Q7Z392 1133 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 DDX42Q86XP3 938 aaKnown RBP eCLIP8.54□□□□□ -1.04
NCSTN-206ENST00000435149 JAMLQ86YT9 394 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 C12orf56Q8IXR9 622 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 GRAMD1CQ8IYS0 662 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 SLC25A45Q8N413 288 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 CCDC47Q96A33 483 aaKnown RBP8.54□□□□□ -1.04
NCSTN-206ENST00000435149 ABHD17AQ96GS6 310 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 PAGE5Q96GU1 130 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 TCTN2Q96GX1 697 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 LURAP1Q96LR2 239 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 XPO6Q96QU8 1125 aaKnown RBP8.54□□□□□ -1.04
NCSTN-206ENST00000435149 SYT15Q9BQS2 421 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 SCAND2PQ9GZW5 306 aaPredicted RBP8.54□□□□□ -1.04
NCSTN-206ENST00000435149 LHX5Q9H2C1 402 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 SNX25Q9H3E2 840 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 TMLHEQ9NVH6 421 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 SERTAD1Q9UHV2 236 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 ERRFI1Q9UJM3 462 aaPredicted RBP8.54□□□□□ -1.04
NCSTN-206ENST00000435149 GTF3C4Q9UKN8 822 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 CDH9Q9ULB4 789 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 TCHHQ07283 1943 aa8.54□□□□□ -1.04
NCSTN-206ENST00000435149 A0A1B0GVL5 298 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 TLR4O00206 839 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 CACNG3O60359 315 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 PHACTR2O75167 634 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 KIF20AO95235 890 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 WARSP23381 471 aaKnown RBP8.53□□□□□ -1.04
NCSTN-206ENST00000435149 ATICP31939 592 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 MAGEA11P43364 429 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 SYKP43405 635 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 AP3M2P53677 418 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 BIRC3Q13489 604 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 EIF2S3LQ2VIR3 472 aaKnown RBP8.53□□□□□ -1.04
NCSTN-206ENST00000435149 WDR72Q3MJ13 1102 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 VSTM1Q6UX27 236 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 LIMS2Q7Z4I7 341 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 OSTM1Q86WC4 334 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 SCN4BQ8IWT1 228 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 TEX19Q8NA77 164 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 IFI44Q8TCB0 444 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 CPT1CQ8TCG5 803 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 KBTBD7Q8WVZ9 684 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 SYAP1Q96A49 352 aaPredicted RBP8.53□□□□□ -1.04
NCSTN-206ENST00000435149 ARRDC3Q96B67 414 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 CCDC34Q96HJ3 373 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 CEP295NLQ96MC4 621 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 PKMYT1Q99640 499 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 RUBCNLQ9H714 662 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 EBF2Q9HAK2 575 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 SGK2Q9HBY8 427 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 EHD2Q9NZN4 543 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 TRPM5Q9NZQ8 1165 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 THAP10Q9P2Z0 257 aaPredicted RBP8.53□□□□□ -1.04
NCSTN-206ENST00000435149 MAGEC2Q9UBF1 373 aaPredicted RBP8.53□□□□□ -1.04
NCSTN-206ENST00000435149 SDK2Q58EX2 2172 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 NUMA1Q14980 2115 aa8.53□□□□□ -1.04
NCSTN-206ENST00000435149 NEDD8-MDP1E9PL57 170 aa8.52□□□□□ -1.05
NCSTN-206ENST00000435149 PDXKO00764 312 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms