RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 PPME1Q9Y570 386 aa15.97■□□□□ 0.15
SCARF1-203ENST00000434376 H3BRJ5 948 aa15.97■□□□□ 0.15
SCARF1-203ENST00000434376 MT-CO1P00395 513 aa15.97■□□□□ 0.15
SCARF1-203ENST00000434376 CHRNA1P02708 482 aa15.97■□□□□ 0.15
SCARF1-203ENST00000434376 CA8P35219 290 aa15.97■□□□□ 0.15
SCARF1-203ENST00000434376 CCR10P46092 362 aa15.97■□□□□ 0.15
SCARF1-203ENST00000434376 SNX16P57768 344 aa15.97■□□□□ 0.15
SCARF1-203ENST00000434376 PRKCZQ05513 592 aa15.97■□□□□ 0.15
SCARF1-203ENST00000434376 CCNJLQ8IV13 435 aa15.97■□□□□ 0.15
SCARF1-203ENST00000434376 GRAMD1AQ96CP6 724 aa15.97■□□□□ 0.15
SCARF1-203ENST00000434376 SPC25Q9HBM1 224 aa15.97■□□□□ 0.15
SCARF1-203ENST00000434376 ETAA1Q9NY74 926 aa15.97■□□□□ 0.15
SCARF1-203ENST00000434376 CNTN3Q9P232 1028 aa15.97■□□□□ 0.15
SCARF1-203ENST00000434376 MORF4L1Q9UBU8 362 aa15.97■□□□□ 0.15
SCARF1-203ENST00000434376 C2CD2LO14523 706 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 NFKB1P19838 968 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 CCND3P30281 292 aaPredicted RBP15.96■□□□□ 0.15
SCARF1-203ENST00000434376 CRYBB1P53674 252 aaPredicted RBP15.96■□□□□ 0.15
SCARF1-203ENST00000434376 STILQ15468 1287 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 N4BP2L1Q5TBK1 243 aaPredicted RBP15.96■□□□□ 0.15
SCARF1-203ENST00000434376 TTC39BQ5VTQ0 682 aaPredicted RBP15.96■□□□□ 0.15
SCARF1-203ENST00000434376 AGMOQ6ZNB7 445 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 ATP2A3Q93084 1043 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 PABPC5Q96DU9 382 aaKnown RBP15.96■□□□□ 0.15
SCARF1-203ENST00000434376 SCYL1Q96KG9 808 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 C20orf27Q9GZN8 174 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 KRT38O76015 456 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 HAUS5O94927 633 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 LTFP02788 710 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 RGS2P41220 211 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 THOC5Q13769 683 aaKnown RBP15.96■□□□□ 0.15
SCARF1-203ENST00000434376 SLC25A52Q3SY17 297 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 CIR1Q86X95 450 aaPredicted RBP15.96■□□□□ 0.15
SCARF1-203ENST00000434376 CFAP61Q8NHU2 1237 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 TRIB2Q92519 343 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 FAM161BQ96MY7 647 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 ZNF670Q9BS34 389 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 NMUR2Q9GZQ4 415 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 SLC39A10Q9ULF5 831 aa15.96■□□□□ 0.15
SCARF1-203ENST00000434376 DCAF8L1A6NGE4 600 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 PIRTP0C851 137 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 ESRRAP11474 423 aaPredicted RBP15.96■□□□□ 0.14
SCARF1-203ENST00000434376 SKIP12755 728 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 TGM2P21980 687 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 SP100P23497 879 aaPredicted RBP15.96■□□□□ 0.14
SCARF1-203ENST00000434376 CHRNA4P43681 627 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 MRPS6P82932 125 aaKnown RBP15.96■□□□□ 0.14
SCARF1-203ENST00000434376 UBAP2LQ14157 1087 aaKnown RBP15.96■□□□□ 0.14
SCARF1-203ENST00000434376 ZNF280DQ6N043 979 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 LRRTM3Q86VH5 581 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 TEX9Q8N6V9 391 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 PAF1Q8N7H5 531 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 ACVR1CQ8NER5 493 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 ZMIZ2Q8NF64 920 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 EXT2Q93063 718 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 E2F7Q96AV8 911 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 SLC7A6OSQ96CW6 309 aaPredicted RBP15.96■□□□□ 0.14
SCARF1-203ENST00000434376 SIGLEC10Q96LC7 697 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 EBNA1BP2Q99848 306 aaKnown RBP15.96■□□□□ 0.14
SCARF1-203ENST00000434376 XPNPEP3Q9NQH7 507 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 IARS2Q9NSE4 1012 aaKnown RBP15.96■□□□□ 0.14
SCARF1-203ENST00000434376 C20orf96Q9NUD7 363 aaPredicted RBP15.96■□□□□ 0.14
SCARF1-203ENST00000434376 NDFIP2Q9NV92 336 aa15.96■□□□□ 0.14
SCARF1-203ENST00000434376 BRCA1P38398 1863 aaKnown RBP15.95■□□□□ 0.14
SCARF1-203ENST00000434376 A6NHS1 94 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 LRIG2O94898 1065 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 T-ENOLP0DO92 83 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 ADRA1BP35368 520 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 RANBP1P43487 201 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 KCNA10Q16322 511 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 RIBC1Q8N443 379 aaPredicted RBP15.95■□□□□ 0.14
SCARF1-203ENST00000434376 ATAD1Q8NBU5 361 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 FBXO27Q8NI29 283 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 FOXP3Q9BZS1 431 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 TRPV6Q9H1D0 765 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 VRTNQ9H8Y1 702 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 TRDMT1O14717 391 aaKnown RBP15.95■□□□□ 0.14
SCARF1-203ENST00000434376 ITM2AO43736 263 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 ATP5HO75947 161 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 ZWINTO95229 277 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 GNAZP19086 355 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 GATMP50440 423 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 EPHB1P54762 984 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 ITGA9Q13797 1035 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 CFAP157Q5JU67 520 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 LGSNQ5TDP6 509 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 LDB1Q86U70 411 aaPredicted RBP15.95■□□□□ 0.14
SCARF1-203ENST00000434376 UNC93AQ86WB7 457 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 TTC9BQ8N6N2 239 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 GSTCDQ8NEC7 633 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 EMID1Q96A84 441 aaPredicted RBP15.95■□□□□ 0.14
SCARF1-203ENST00000434376 APOPT1Q96IL0 206 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 KLHL5Q96PQ7 755 aa15.95■□□□□ 0.14
SCARF1-203ENST00000434376 OXCT2Q9BYC2 517 aaPredicted RBP15.95■□□□□ 0.14
SCARF1-203ENST00000434376 A0A0A0MRY4 1105 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 CHADO15335 359 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 SETSIPP0DME0 302 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 AKR1A1P14550 325 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 ETS2P15036 469 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 INHBEP58166 350 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms