RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 EDC3Q96F86 508 aaKnown RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 ZNF845Q96IR2 970 aaPredicted RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 TBATAQ96M53 351 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 LENG8Q96PV6 779 aaPredicted RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 TRAPPC9Q96Q05 1148 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 PYM1Q9BRP8 204 aaKnown RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 FAM167BQ9BTA0 163 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TRMOQ9BU70 441 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TWSG1Q9GZX9 223 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 NUAK2Q9H093 628 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 BRD8Q9H0E9 1235 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 PABPC3Q9H361 631 aaKnown RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 MLXIPQ9HAP2 919 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 PTPRHQ9HD43 1115 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 G6PC2Q9NQR9 355 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 GJB4Q9NTQ9 266 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 ABHD10Q9NUJ1 306 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 ARL8BQ9NVJ2 186 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 SEMA5BQ9P283 1151 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 IGSF9Q9P2J2 1179 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 IPO11Q9UI26 975 aaKnown RBP2.41□□□□□ -2.02
CDC40-204ENST00000431461 SLC13A4Q9UKG4 626 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 GTF2A1LQ9UNN4 478 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 ICKQ9UPZ9 632 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 SQORQ9Y6N5 450 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 DGKBQ9Y6T7 804 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 EMSYQ7Z589 1322 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 TTC3P53804 2025 aa2.41□□□□□ -2.02
CDC40-204ENST00000431461 CYP3A7-CYP3A51PA0A087WV96 503 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 LOC102724159A0A0B4J2E5 919 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 HMX3A6NHT5 357 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 AQP12BA6NM10 295 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 AGPSO00116 658 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 CLIC1O00299 241 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 DNPH1O43598 174 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 CREB3O43889 395 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 NBNO60934 754 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 GUCY1B2O75343 617 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 HLA-DQA2P01906 255 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 LCKP06239 509 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 APEHP13798 732 aaKnown RBP2.4□□□□□ -2.03
CDC40-204ENST00000431461 IGFBP2P18065 325 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 TFEBP19484 476 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 TGM2P21980 687 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 CYP3A7P24462 503 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 MCM5P33992 734 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 GALNSP34059 522 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 THBS4P35443 961 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 HOXD12P35452 270 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 ADD2P35612 726 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 PBX1P40424 430 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 TLE2Q04725 743 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 GALNT1Q10472 559 aaPredicted RBP2.4□□□□□ -2.03
CDC40-204ENST00000431461 TBL3Q12788 808 aaKnown RBP2.4□□□□□ -2.03
CDC40-204ENST00000431461 PWP2Q15269 919 aaKnown RBP2.4□□□□□ -2.03
CDC40-204ENST00000431461 SMAD1Q15797 465 aaKnown RBP2.4□□□□□ -2.03
CDC40-204ENST00000431461 RNASE12Q5GAN4 147 aaKnown RBP2.4□□□□□ -2.03
CDC40-204ENST00000431461 UBAP2Q5T6F2 1119 aaKnown RBP2.4□□□□□ -2.03
CDC40-204ENST00000431461 CCDC174Q6PII3 467 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 RANBP10Q6VN20 620 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 SLC39A5Q6ZMH5 540 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 DEF8Q6ZN54 512 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.4□□□□□ -2.03
CDC40-204ENST00000431461 SLC22A17Q8WUG5 538 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 STYXQ8WUJ0 223 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 C3orf49Q96BT1 292 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 C18orf8Q96DM3 657 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 CLMNQ96JQ2 1002 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 SIGLEC11Q96RL6 698 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 POLR3GLQ9BT43 218 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 TAF1DQ9H5J8 278 aaPredicted RBP2.4□□□□□ -2.03
CDC40-204ENST00000431461 PPCSQ9HAB8 311 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 PRDM16Q9HAZ2 1276 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 VPS45Q9NRW7 570 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 POT1Q9NUX5 634 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 CNTN6Q9UQ52 1028 aa2.4□□□□□ -2.03
CDC40-204ENST00000431461 ZMYM2Q9UBW7 1377 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 LOC105369274A0A096LPK9 316 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 LOC102723532A0A0G2JNH3 316 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 FAM90A18PA6NE21 464 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 FAM90A16PA6NEW6 464 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 FAM90A9PA6NNJ1 464 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 SLC38A8A6NNN8 435 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 PRSS47A8MTI9 375 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 FAM90A5PA8MXJ8 464 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 HMGB1P1B2RPK0 211 aaPredicted RBP2.39□□□□□ -2.03
CDC40-204ENST00000431461 PRPF4O43172 522 aaKnown RBP eCLIP2.39□□□□□ -2.03
CDC40-204ENST00000431461 TLR2O60603 784 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 RPP40O75818 363 aaKnown RBP2.39□□□□□ -2.03
CDC40-204ENST00000431461 PDE8BO95263 885 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 VNN1O95497 513 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 CER1O95813 267 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 TOMM40O96008 361 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 FAM90A15PP0C7V4 464 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 FAM90A14PP0C7W9 464 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 AKR1A1P14550 325 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 XBP1P17861 261 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 TNFRSF1BP20333 461 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 NDUFS1P28331 727 aa2.39□□□□□ -2.03
CDC40-204ENST00000431461 DDIT3P35638 169 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms