RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 TBCDQ9BTW9 1192 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 MRPL9Q9BYD2 267 aaKnown RBP15.69■□□□□ 0.1
PTPRF-206ENST00000429895 C10orf88Q9H8K7 445 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 BATF3Q9NR55 127 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 KLHL3Q9UH77 587 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 SPATA2Q9UM82 520 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 NDUFAF1Q9Y375 327 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 GPSM3Q9Y4H4 160 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 CDC42BPBQ9Y5S2 1711 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 ZBTB14O43829 449 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 NPY2RP49146 381 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 TOB1P50616 345 aaPredicted RBP15.69■□□□□ 0.1
PTPRF-206ENST00000429895 CNTN2Q02246 1040 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 CXorf40AQ8TE69 158 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 ZNF606Q8WXB4 792 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 OLFM1Q99784 485 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 NMRAL1Q9HBL8 299 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 SMIM31A0A1B0GVY4 71 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 USP12O75317 370 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 ITGAXP20702 1163 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 SPIDRQ14159 915 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 CRY1Q16526 586 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 SYT12Q8IV01 421 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 ST13P5Q8NFI4 369 aaPredicted RBP15.69■□□□□ 0.1
PTPRF-206ENST00000429895 BTBD9Q96Q07 612 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 DCLK3Q9C098 648 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 ENTPD4Q9Y227 616 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 EML3Q32P44 896 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 ZNF57Q68EA5 555 aaPredicted RBP15.69■□□□□ 0.1
PTPRF-206ENST00000429895 TTI2Q6NXR4 508 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 MFSD7Q6UXD7 560 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 EID3Q8N140 333 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 CACTIN-AS1Q8N1I8 211 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 NSMCE2Q96MF7 247 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 CDHR5Q9HBB8 845 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 MRPL17Q9NRX2 175 aaKnown RBP15.69■□□□□ 0.1
PTPRF-206ENST00000429895 NFKB1P19838 968 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 IL27RAQ6UWB1 636 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 RNF148Q8N7C7 305 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 MOSPD2Q8NHP6 518 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 FAM45AQ8TCE6 357 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 SIKE1Q9BRV8 207 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 HGH1Q9BTY7 390 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 ELOVL4Q9GZR5 314 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 JAK1P23458 1154 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 HPCAL1P37235 193 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 SPANXN3Q5MJ09 141 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 IZUMO1Q8IYV9 350 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 C6orf62Q9GZU0 229 aaPredicted RBP15.68■□□□□ 0.1
PTPRF-206ENST00000429895 ARL15Q9NXU5 204 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 PAIP2BQ9ULR5 123 aaKnown RBP15.68■□□□□ 0.1
PTPRF-206ENST00000429895 COQ6Q9Y2Z9 468 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 MMP13P45452 471 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 RAD23AP54725 363 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 IZUMO2Q6UXV1 221 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 ACTRT1Q8TDG2 376 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 KLHL25Q9H0H3 589 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 TM9SF1O15321 606 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 VIL1P09327 827 aaKnown RBP15.68■□□□□ 0.1
PTPRF-206ENST00000429895 CYB5D1Q6P9G0 228 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 C1QTNF7Q9BXJ2 289 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 NAALADL1Q9UQQ1 740 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 FAM50BQ9Y247 325 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 NEXMIFQ5QGS0 1516 aa15.68■□□□□ 0.1
PTPRF-206ENST00000429895 TRDMT1O14717 391 aaKnown RBP15.67■□□□□ 0.1
PTPRF-206ENST00000429895 C4BPBP20851 252 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 IKBKEQ14164 716 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 CYP2A13Q16696 494 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 CYP2R1Q6VVX0 501 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 USP45Q70EL2 814 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 TMEM132CQ8N3T6 1108 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 NMD3Q96D46 503 aaKnown RBP15.67■□□□□ 0.1
PTPRF-206ENST00000429895 ADPRHL2Q9NX46 363 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 CROTQ9UKG9 612 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 NFASCO94856 1347 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 ATP5BP06576 529 aaKnown RBP15.67■□□□□ 0.1
PTPRF-206ENST00000429895 FASP25445 335 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 C1QBPQ07021 282 aaKnown RBP15.67■□□□□ 0.1
PTPRF-206ENST00000429895 BIKQ13323 160 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 CLEC17AQ6ZS10 378 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 BTN2A1Q7KYR7 527 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 ZSCAN18Q8TBC5 510 aaPredicted RBP15.67■□□□□ 0.1
PTPRF-206ENST00000429895 RNF145Q96MT1 663 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 S100A13Q99584 98 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 SEMA4BQ9NPR2 832 aaPredicted RBP15.67■□□□□ 0.1
PTPRF-206ENST00000429895 GALNT8Q9NY28 637 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 ANKDD1BA6NHY2 528 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 ACSL4O60488 711 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 COX7A2P14406 83 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 CRABP2P29373 138 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 PRAMEF19Q5SWL8 479 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 ZCCHC23Q6ZST2 131 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 FAM126BQ8IXS8 530 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 KYQ8NBH2 561 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 ELMO1Q92556 727 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 GAD1Q99259 594 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 CPNE1Q99829 537 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 PCDH9Q9HC56 1237 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 LRRC4BQ9NT99 713 aa15.67■□□□□ 0.1
PTPRF-206ENST00000429895 ZNHIT2Q9UHR6 403 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms