RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 CCDC105Q8IYK2 499 aa11.16□□□□□ -0.62
CRIM1-204ENST00000428774 ALLCQ8N6M5 410 aa11.16□□□□□ -0.62
CRIM1-204ENST00000428774 GLIS1Q8NBF1 620 aa11.16□□□□□ -0.62
CRIM1-204ENST00000428774 SH3RF2Q8TEC5 729 aa11.16□□□□□ -0.62
CRIM1-204ENST00000428774 CELF6Q96J87 481 aaKnown RBP11.16□□□□□ -0.62
CRIM1-204ENST00000428774 MSLNLQ96KJ4 702 aa11.16□□□□□ -0.62
CRIM1-204ENST00000428774 RUNDC3BQ96NL0 473 aa11.16□□□□□ -0.62
CRIM1-204ENST00000428774 RPRD1AQ96P16 312 aaPredicted RBP11.16□□□□□ -0.62
CRIM1-204ENST00000428774 ZYG11BQ9C0D3 744 aa11.16□□□□□ -0.62
CRIM1-204ENST00000428774 CATSPERBQ9H7T0 1116 aa11.16□□□□□ -0.62
CRIM1-204ENST00000428774 UBE2ZQ9H832 354 aaPredicted RBP11.16□□□□□ -0.62
CRIM1-204ENST00000428774 HOMER3Q9NSC5 361 aa11.16□□□□□ -0.62
CRIM1-204ENST00000428774 TMEM248Q9NWD8 314 aa11.16□□□□□ -0.62
CRIM1-204ENST00000428774 LSM7Q9UK45 103 aaKnown RBP11.16□□□□□ -0.62
CRIM1-204ENST00000428774 SH3BP1Q9Y3L3 701 aa11.16□□□□□ -0.62
CRIM1-204ENST00000428774 NEU2Q9Y3R4 380 aa11.16□□□□□ -0.62
CRIM1-204ENST00000428774 BRWD1Q9NSI6 2320 aa11.16□□□□□ -0.62
CRIM1-204ENST00000428774 C5orf42Q9H799 3197 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.15□□□□□ -0.62
CRIM1-204ENST00000428774 ESYT3A0FGR9 886 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 GRXCR2A6NFK2 248 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 FAM187AA6NFU0 413 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 DRGXA6NNA5 263 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 H7C0C1 242 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 TSPAN3O60637 253 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 ITGAVP06756 1048 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 TCF3P15923 654 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 KCNA5P22460 613 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 FSHRP23945 695 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 SERPINB6P35237 376 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 ATP5OP48047 213 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 NR2C2P49116 596 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 NRLP54845 237 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 RPS24P62847 133 aaKnown RBP11.15□□□□□ -0.62
CRIM1-204ENST00000428774 GALNT2Q10471 571 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 PTK6Q13882 451 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 CBX2Q14781 532 aaPredicted RBP11.15□□□□□ -0.62
CRIM1-204ENST00000428774 PRKD1Q15139 912 aaPredicted RBP11.15□□□□□ -0.62
CRIM1-204ENST00000428774 ACBD5Q5T8D3 534 aaPredicted RBP11.15□□□□□ -0.62
CRIM1-204ENST00000428774 AFMIDQ63HM1 303 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 LRRC31Q6UY01 552 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 HTR3DQ70Z44 454 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 TFAP2DQ7Z6R9 452 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 DDX42Q86XP3 938 aaKnown RBP eCLIP11.15□□□□□ -0.62
CRIM1-204ENST00000428774 CDKL3Q8IVW4 592 aaPredicted RBP11.15□□□□□ -0.62
CRIM1-204ENST00000428774 BBS7Q8IWZ6 715 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 TTC16Q8NEE8 873 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 CCDC26Q8TAB7 109 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 GRK7Q8WTQ7 553 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 DEPDC1BQ8WUY9 529 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 RSPRY1Q96DX4 576 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 P2RY11Q96G91 374 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 HINFPQ9BQA5 517 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 TMEM121Q9BTD3 319 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 S1PR5Q9H228 398 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 NOL6Q9H6R4 1146 aaKnown RBP11.15□□□□□ -0.62
CRIM1-204ENST00000428774 STIM2Q9P246 746 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 ZMYM5Q9UJ78 669 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 DRG1Q9Y295 367 aaKnown RBP11.15□□□□□ -0.62
CRIM1-204ENST00000428774 ZFP37Q9Y6Q3 630 aaPredicted RBP11.15□□□□□ -0.62
CRIM1-204ENST00000428774 XIRP2A4UGR9 3374 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 COL6A3P12111 3177 aa11.15□□□□□ -0.62
CRIM1-204ENST00000428774 SPTBN5Q9NRC6 3674 aaKnown RBP11.15□□□□□ -0.62
CRIM1-204ENST00000428774 DOCK8Q8NF50 2099 aa11.15□□□□□ -0.63
CRIM1-204ENST00000428774 TCF20Q9UGU0 1960 aaKnown RBP11.14□□□□□ -0.63
CRIM1-204ENST00000428774 TARSL2A2RTX5 802 aaKnown RBP11.14□□□□□ -0.63
CRIM1-204ENST00000428774 GAS8O95995 478 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 ETS1P14921 441 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 HOXB8P17481 243 aaPredicted RBP11.14□□□□□ -0.63
CRIM1-204ENST00000428774 RBL1P28749 1068 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 VSNL1P62760 191 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 TUBB4BP68371 445 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 XRCC4Q13426 336 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 TRIP13Q15645 432 aaPredicted RBP11.14□□□□□ -0.63
CRIM1-204ENST00000428774 SLC45A4Q5BKX6 768 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 RABGAP1LQ5R372 815 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 FAM182AQ5T1J6 154 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 ADGRF1Q5T601 910 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 CCDC70Q6NSX1 233 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 DARS2Q6PI48 645 aaKnown RBP11.14□□□□□ -0.63
CRIM1-204ENST00000428774 MAATS1Q7Z4T9 603 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 ARID3BQ8IVW6 561 aaPredicted RBP11.14□□□□□ -0.63
CRIM1-204ENST00000428774 GSPT2Q8IYD1 628 aaKnown RBP11.14□□□□□ -0.63
CRIM1-204ENST00000428774 CFAP52Q8N1V2 620 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 CPXM2Q8N436 756 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 GPR161Q8N6U8 529 aaKnown RBP11.14□□□□□ -0.63
CRIM1-204ENST00000428774 ATL2Q8NHH9 583 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 ZSCAN18Q8TBC5 510 aaPredicted RBP11.14□□□□□ -0.63
CRIM1-204ENST00000428774 CASKIN2Q8WXE0 1202 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 HDAC11Q96DB2 347 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 SLC39A8Q9C0K1 460 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 DPH5Q9H2P9 285 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 ADAM7Q9H2U9 754 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 KIF9Q9HAQ2 790 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 TDP1Q9NUW8 608 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 ZNF148Q9UQR1 794 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 RAD54BQ9Y620 910 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 COL4A2P08572 1712 aa11.14□□□□□ -0.63
CRIM1-204ENST00000428774 A0A1B0GVM2 712 aa11.13□□□□□ -0.63
CRIM1-204ENST00000428774 E2F8A0AVK6 867 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 205.5 ms