RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 PXMP2Q9NR77 195 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 SPATA7Q9P0W8 599 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 ARHGAP28Q9P2N2 729 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 UBA2Q9UBT2 640 aaPredicted RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 ITGB1BP2Q9UKP3 347 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 TBX20Q9UMR3 447 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 MOXD2PA6NHM9 499 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 SLC15A5A6NIM6 579 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 RBMXL2O75526 392 aaKnown RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 SNUPNO95149 360 aaKnown RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 KLHL2O95198 593 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 NFATC1O95644 943 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 SERPINF2P08697 491 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 H2AFXP16104 143 aaPredicted RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 TALDO1P37837 337 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 PRCPP42785 496 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 PCYT1AP49585 367 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 GPR15P49685 360 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 SERPINB8P50452 374 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 PRMT2P55345 433 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 CCINQ13939 588 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 LPIN1Q14693 890 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 FBXO38Q6PIJ6 1188 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 METTL7BQ6UX53 244 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 LRRC8DQ7L1W4 858 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 PHYKPLQ8IUZ5 450 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 ADCY4Q8NFM4 1077 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 NSUN4Q96CB9 384 aaKnown RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 GRAMD1AQ96CP6 724 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 RMND5BQ96G75 393 aaPredicted RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 C2orf49Q9BVC5 232 aaPredicted RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 SERHL2Q9H4I8 314 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 KLHL31Q9H511 634 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 SERHLQ9NQF3 203 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.85□□□□□ -1.47
HERC4-206ENST00000427635 UBP1Q9NZI7 540 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 HBS1LQ9Y450 684 aaKnown RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 PCDHA11Q9Y5I1 949 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 CDY2AQ9Y6F7 541 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 CDY1Q9Y6F8 540 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 LRRC72A6NJI9 287 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 ISM1B1AKI9 464 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 LYNP07948 512 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 CSH1P0DML2 217 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 CSH2P0DML3 217 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 LBPP18428 481 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 EIF4BP23588 611 aaKnown RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 ATP5C1P36542 298 aaKnown RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 ATP12AP54707 1039 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 MRPS6P82932 125 aaKnown RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 GUCY1A3Q02108 690 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 RESTQ13127 1097 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 C1DQ13901 141 aaKnown RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 BOLA3Q53S33 107 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 FBXO47Q5MNV8 452 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 PMF1Q6P1K2 205 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 RASSF6Q6ZTQ3 369 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 TRPM8Q7Z2W7 1104 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 PARGQ86W56 976 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 IFNEQ86WN2 208 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 CCDC54Q8NEL0 328 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 ACMSDQ8TDX5 336 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 KAT2BQ92831 832 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 TBC1D20Q96BZ9 403 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 PPP1R10Q96QC0 940 aaKnown RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 IRX2Q9BZI1 471 aaPredicted RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 NPHS2Q9NP85 383 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 GRID1Q9ULK0 1009 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 A0A096LPK6 155 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 PIPSLA2A3N6 862 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 TGFB3P10600 412 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 AGXTP21549 392 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 MAPKAPK2P49137 400 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 SULT2A1Q06520 285 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 ZMYND11Q15326 602 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 NFIL3Q16649 462 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 SLC44A4Q53GD3 710 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 NOMO2Q5JPE7 1267 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 HECTD3Q5T447 861 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 PSRC1Q6PGN9 363 aaPredicted RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 POTEAQ6S8J7 498 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 SETD7Q8WTS6 366 aaKnown RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 NACC2Q96BF6 587 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 REEP2Q9BRK0 252 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 NRDE2Q9H7Z3 1164 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 CRTAC1Q9NQ79 661 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 PCDHB2Q9Y5E7 798 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 PDS5AQ29RF7 1337 aaKnown RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 PNPLA7Q6ZV29 1317 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 E2F8A0AVK6 867 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 USP27XA6NNY8 438 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 USP1O94782 785 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 PLGP00747 810 aaPredicted RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 TFPIP10646 304 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 PIK3R1P27986 724 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 RAB14P61106 215 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 ETF1P62495 437 aaKnown RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 NBPF12Q5TAG4 269 aaPredicted RBP5.84□□□□□ -1.47
HERC4-206ENST00000427635 MARC1Q5VT66 337 aa5.84□□□□□ -1.47
HERC4-206ENST00000427635 CDC73Q6P1J9 531 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms