RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 NMRK1Q9NWW6 199 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 MARCH2Q9P0N8 246 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 CD84Q9UIB8 345 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 SLITRK3O94933 977 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 NTRK1P04629 796 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 SERPINF2P08697 491 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 TTC33Q6PID6 262 aaPredicted RBP13.42□□□□□ -0.26
SPG11-202ENST00000427534 KCNMB4Q86W47 210 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 FUCA2Q9BTY2 467 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 TRPC5OSA6NMA1 111 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 FAM25AB3EWG3 89 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 FAM25CB3EWG5 89 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 FAM25GB3EWG6 89 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 MDM4O15151 490 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 TOMM70O94826 608 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 MPP3Q13368 585 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 TAF5Q15542 800 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 HNRNPLLQ8WVV9 542 aaKnown RBP13.42□□□□□ -0.26
SPG11-202ENST00000427534 JSRP1Q96MG2 331 aaPredicted RBP13.42□□□□□ -0.26
SPG11-202ENST00000427534 TINF2Q9BSI4 451 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 MAT2BQ9NZL9 334 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 UBA2Q9UBT2 640 aaPredicted RBP13.42□□□□□ -0.26
SPG11-202ENST00000427534 M0R3G1 203 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 PHGDHO43175 533 aaKnown RBP13.42□□□□□ -0.26
SPG11-202ENST00000427534 MMRN1Q13201 1228 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 NRSN1Q8IZ57 195 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 SAMD3Q8N6K7 520 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 NLGN2Q8NFZ4 835 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 SLC5A5Q92911 643 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 TADA1Q96BN2 335 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 AKAP7Q9P0M2 348 aaPredicted RBP13.42□□□□□ -0.26
SPG11-202ENST00000427534 CACNG4Q9UBN1 327 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 B4GALT5O43286 388 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 RARGP13631 454 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 BRCC3P46736 316 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 COPAP53621 1224 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 DNERQ8NFT8 737 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 L2HGDHQ9H9P8 463 aa13.42□□□□□ -0.26
SPG11-202ENST00000427534 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.42□□□□□ -0.26
SPG11-202ENST00000427534 COL3A1P02461 1466 aaPredicted RBP13.42□□□□□ -0.26
SPG11-202ENST00000427534 PSMA4P25789 261 aaKnown RBP13.41□□□□□ -0.26
SPG11-202ENST00000427534 IRX1P78414 480 aaPredicted RBP13.41□□□□□ -0.26
SPG11-202ENST00000427534 PDPK2PQ6A1A2 396 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 USP50Q70EL3 339 aaPredicted RBP13.41□□□□□ -0.26
SPG11-202ENST00000427534 LEMD2Q8NC56 503 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 FBXO6Q9NRD1 293 aaPredicted RBP13.41□□□□□ -0.26
SPG11-202ENST00000427534 TRIM43BA6NCK2 446 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 H3BN98 237 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 ACSL4O60488 711 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 KLHL2O95198 593 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 OR6A2O95222 327 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 PCCBP05166 539 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 OR56A5P0C7T3 313 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 LSP1P33241 339 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 PEX5P50542 639 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 CBWD6Q4V339 395 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 C16orf62Q7Z3J2 963 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 TNFSF13BQ9Y275 285 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 TNS2Q63HR2 1409 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 F8VZ95 297 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 CLTBP09497 229 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 CCT8P50990 548 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 FBXL16Q8N461 479 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 GLIS3Q8NEA6 775 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 CXorf40BQ96DE9 158 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 FAM120BQ96EK7 910 aaKnown RBP13.41□□□□□ -0.26
SPG11-202ENST00000427534 RHOBTB2Q9BYZ6 727 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 OLFML3Q9NRN5 406 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 KIDINS220Q9ULH0 1771 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 FLT3LGP49771 235 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 ARMC12Q5T9G4 340 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 CYP2R1Q6VVX0 501 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 SNRNP27Q8WVK2 155 aaKnown RBP13.41□□□□□ -0.26
SPG11-202ENST00000427534 KLK6Q92876 244 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 NSL1Q96IY1 281 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 SEMA6AQ9H2E6 1030 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 ARL15Q9NXU5 204 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 PPP2R3BQ9Y5P8 575 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 NWD1Q149M9 1564 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 MTSS1O43312 755 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 UBA1P22314 1058 aaKnown RBP13.41□□□□□ -0.26
SPG11-202ENST00000427534 TBX2Q13207 712 aaPredicted RBP13.41□□□□□ -0.26
SPG11-202ENST00000427534 AKIRIN2Q53H80 203 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 IL27RAQ6UWB1 636 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 C4orf22Q6V702 233 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 DSELQ8IZU8 1212 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 OR8H2Q8N162 312 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 MYLPFQ96A32 169 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 DCDC2Q9UHG0 476 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 LRRC14BA6NHZ5 514 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 KIF1CO43896 1103 aaKnown RBP13.41□□□□□ -0.26
SPG11-202ENST00000427534 ALAS2P22557 587 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 MRPS6P82932 125 aaKnown RBP13.41□□□□□ -0.26
SPG11-202ENST00000427534 IL5RAQ01344 420 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 MAPK7Q13164 816 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 CYLC2Q14093 348 aaPredicted RBP13.41□□□□□ -0.26
SPG11-202ENST00000427534 TRPM8Q7Z2W7 1104 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 RIBC1Q8N443 379 aaPredicted RBP13.41□□□□□ -0.26
SPG11-202ENST00000427534 DPP10Q8N608 796 aa13.41□□□□□ -0.26
SPG11-202ENST00000427534 DPY30Q9C005 99 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms