RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 KCNV1Q6PIU1 500 aa7.07□□□□□ -1.28
HMGB1P32-201ENST00000425971 BBS12Q6ZW61 710 aa7.07□□□□□ -1.28
HMGB1P32-201ENST00000425971 ESX1Q8N693 406 aa7.07□□□□□ -1.28
HMGB1P32-201ENST00000425971 XAGE5Q8WWM1 108 aa7.07□□□□□ -1.28
HMGB1P32-201ENST00000425971 GOLGA1Q92805 767 aa7.07□□□□□ -1.28
HMGB1P32-201ENST00000425971 MAELQ96JY0 434 aaKnown RBP7.07□□□□□ -1.28
HMGB1P32-201ENST00000425971 WDR11Q9BZH6 1224 aa7.07□□□□□ -1.28
HMGB1P32-201ENST00000425971 TMEM160Q9NX00 188 aa7.07□□□□□ -1.28
HMGB1P32-201ENST00000425971 KCND3Q9UK17 655 aa7.07□□□□□ -1.28
HMGB1P32-201ENST00000425971 SLC13A4Q9UKG4 626 aa7.07□□□□□ -1.28
HMGB1P32-201ENST00000425971 TMEM98Q9Y2Y6 226 aa7.07□□□□□ -1.28
HMGB1P32-201ENST00000425971 UBE2J1Q9Y385 318 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P32-201ENST00000425971 DLEC1Q9Y238 1755 aa7.07□□□□□ -1.28
HMGB1P32-201ENST00000425971 PEX1O43933 1283 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 FOXD2O60548 495 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 ADRA1DP25100 572 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 HMGB2P26583 209 aaKnown RBP7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 ITPKBP27987 946 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 TPTEP56180 551 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 VAMP2P63027 116 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 DGCR2P98153 550 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 E2F1Q01094 437 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 UBE3AQ05086 875 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 DEUP1Q05D60 604 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 DDX10Q13206 875 aaKnown RBP7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 SEMA3BQ13214 749 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 TUBA3CQ13748 450 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 LCE4AQ5TA78 99 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 RETSATQ6NUM9 610 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 TUBA3EQ6PEY2 450 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 SYT13Q7L8C5 426 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 TMEM57Q8N5G2 664 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 RP9Q8TA86 221 aaKnown RBP7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 PROKR1Q8TCW9 393 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 ZNF503Q96F45 646 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 EIF3CQ99613 913 aaKnown RBP7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 UBN1Q9NPG3 1134 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 LIN7CQ9NUP9 197 aaKnown RBP7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 FBXO28Q9NVF7 368 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 PI4KBQ9UBF8 816 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 DERAQ9Y315 318 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 PCDHB7Q9Y5E2 793 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 TTC28Q96AY4 2481 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 ITGB4P16144 1822 aa7.06□□□□□ -1.28
HMGB1P32-201ENST00000425971 SCN11AQ9UI33 1791 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 MAST3O60307 1309 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 TRPM7Q96QT4 1865 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 M0QYT0 321 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 KRT38O76015 456 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 RHOBTB3O94955 611 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 EPHX2P34913 555 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 THBS4P35443 961 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 FAM3BP58499 235 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 SUMO2P61956 95 aaKnown RBP7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 CHRNDQ07001 517 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 SLC12A1Q13621 1099 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 AAK1Q2M2I8 961 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 TBRG1Q3YBR2 411 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 MIIPQ5JXC2 388 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 PTCHD4Q6ZW05 846 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 Q6ZWC4 215 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 USP51Q70EK9 711 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 CTU1Q7Z7A3 348 aaKnown RBP7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 P3H2Q8IVL5 708 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 PPHLN1Q8NEY8 458 aaKnown RBP7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 SLC2A12Q8TD20 617 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 NPIPB3Q92617 1050 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 VPS50Q96JG6 964 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 SEC62Q99442 399 aaKnown RBP7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 DPCDQ9BVM2 203 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 CCDC134Q9H6E4 229 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 CHODLQ9H9P2 273 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 SLC2A4RGQ9NR83 387 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 TMLHEQ9NVH6 421 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 ASAP1Q9ULH1 1129 aa7.05□□□□□ -1.28
HMGB1P32-201ENST00000425971 FER1L6Q2WGJ9 1857 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 MUC3AQ02505 3323 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 TTC21BQ7Z4L5 1316 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 ZNF541Q9H0D2 1346 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 NR2F6P10588 404 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 ALADP13716 330 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 CREB1P16220 341 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 LIFRP42702 1097 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 TRPC3Q13507 836 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 BFSP2Q13515 415 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 DNASE1L3Q13609 305 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 FAM187BQ17R55 369 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 LY6G5CQ5SRR4 150 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 FNDC7Q5VTL7 733 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 C16orf89Q6UX73 402 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 Q6ZNX1 250 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 RASGRP2Q7LDG7 609 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 ZNF551Q7Z340 670 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 TFAP2BQ92481 460 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 REXO5Q96IC2 774 aaKnown RBP7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 UNC45AQ9H3U1 944 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 SAP30LQ9HAJ7 183 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 ARHGEF3Q9NR81 526 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 HACL1Q9UJ83 578 aa7.04□□□□□ -1.28
HMGB1P32-201ENST00000425971 DNAJC16Q9Y2G8 782 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms