RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 CENPCQ03188 943 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 NME3Q13232 169 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 SMYD5Q6GMV2 418 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 SLC26A9Q7LBE3 791 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 LUZP1Q86V48 1076 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 CCDC117Q8IWD4 279 aaPredicted RBP15.69■□□□□ 0.1
USB1-202ENST00000423271 APCDD1Q8J025 514 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 ANKRD20A12PQ8NF67 263 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 RNF34Q969K3 372 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 MIR1-1HGQ9H1L0 117 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 C6orf106Q9H6K1 298 aaPredicted RBP15.69■□□□□ 0.1
USB1-202ENST00000423271 SYNCQ9H7C4 482 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 FBRSQ9HAH7 460 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 SUSD2Q9UGT4 822 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 ERVW-1Q9UQF0 538 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 CEP83Q9Y592 693 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 SLCO1B1Q9Y6L6 691 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 KNL1Q8NG31 2342 aa15.69■□□□□ 0.1
USB1-202ENST00000423271 NYNRINQ9P2P1 1898 aaKnown RBP15.69■□□□□ 0.1
USB1-202ENST00000423271 TTC34A8MYJ7 566 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 UCHL3P15374 230 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 GNSP15586 552 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 TFE3P19532 575 aaPredicted RBP15.68■□□□□ 0.1
USB1-202ENST00000423271 ABCB4P21439 1286 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 CCR1P32246 355 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 KLK7P49862 253 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 BPIFB4P59827 614 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 ST8SIA6P61647 398 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 SEMA3BQ13214 749 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 HNRNPA1L2Q32P51 320 aaKnown RBP15.68■□□□□ 0.1
USB1-202ENST00000423271 ZNF776Q68DI1 518 aaPredicted RBP15.68■□□□□ 0.1
USB1-202ENST00000423271 FBXL22Q6P050 247 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 LRSAM1Q6UWE0 723 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 APTXQ7Z2E3 356 aaKnown RBP15.68■□□□□ 0.1
USB1-202ENST00000423271 NOP9Q86U38 636 aaKnown RBP15.68■□□□□ 0.1
USB1-202ENST00000423271 CCAR2Q8N163 923 aaKnown RBP15.68■□□□□ 0.1
USB1-202ENST00000423271 IGSF8Q969P0 613 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 RSPH9Q9H1X1 276 aaPredicted RBP15.68■□□□□ 0.1
USB1-202ENST00000423271 GANQ9H2C0 597 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 PDCL3Q9H2J4 239 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 RTN4Q9NQC3 1192 aaKnown RBP15.68■□□□□ 0.1
USB1-202ENST00000423271 KIAA1522Q9P206 1035 aaPredicted RBP15.68■□□□□ 0.1
USB1-202ENST00000423271 SUN2Q9UH99 717 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 EIF2B4Q9UI10 523 aaKnown RBP15.68■□□□□ 0.1
USB1-202ENST00000423271 ANGPTL2Q9UKU9 493 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 FRYQ5TBA9 3013 aa15.68■□□□□ 0.1
USB1-202ENST00000423271 A0A1B0GTW7 788 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 LGALS16A8MUM7 142 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 F8VZ95 297 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 M0QYT0 321 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 OPHN1O60890 802 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 DNTTP04053 509 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 SYPP08247 313 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 SLC2A3P11169 496 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 CEACAM1P13688 526 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 PDGFRAP16234 1089 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 MZF1P28698 734 aaPredicted RBP15.67■□□□□ 0.1
USB1-202ENST00000423271 CDH5P33151 784 aaPredicted RBP15.67■□□□□ 0.1
USB1-202ENST00000423271 NOS2P35228 1153 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 STK19P49842 368 aaPredicted RBP15.67■□□□□ 0.1
USB1-202ENST00000423271 RNASE9P60153 205 aaKnown RBP15.67■□□□□ 0.1
USB1-202ENST00000423271 GRIK2Q13002 908 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 C2CD6Q53TS8 623 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 CXorf57Q6NSI4 855 aaKnown RBP15.67■□□□□ 0.1
USB1-202ENST00000423271 PIP4P1Q86T03 277 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 HDDC3Q8N4P3 179 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 TMEM35BQ8NCS4 154 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 ZNF397Q8NF99 534 aaPredicted RBP15.67■□□□□ 0.1
USB1-202ENST00000423271 SNX19Q92543 992 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 RPL10LQ96L21 214 aaKnown RBP15.67■□□□□ 0.1
USB1-202ENST00000423271 RPRD1AQ96P16 312 aaPredicted RBP15.67■□□□□ 0.1
USB1-202ENST00000423271 TSPY26PQ9H489 355 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 SLC12A6Q9UHW9 1150 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 SLCO3A1Q9UIG8 710 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 VANGL2Q9ULK5 521 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 HS3ST4Q9Y661 456 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 ITIH6Q6UXX5 1313 aa15.67■□□□□ 0.1
USB1-202ENST00000423271 SPEGQ15772 3267 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 A0A1B0GVM2 712 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 TCAF2A6NFQ2 919 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 LRRC10BA6NIK2 292 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 I6L893 689 aaPredicted RBP15.66■□□□□ 0.1
USB1-202ENST00000423271 PAGE1O75459 146 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 GJB3O75712 270 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 MOCS3O95396 460 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 SEMA4FO95754 770 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 SRPRAP08240 638 aaKnown RBP15.66■□□□□ 0.1
USB1-202ENST00000423271 MATKP42679 507 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 SNX16P57768 344 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 SHC2P98077 582 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 ECT2LQ008S8 904 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 BNC1Q01954 994 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 ZBTB16Q05516 673 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 FOXC1Q12948 553 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 AUHQ13825 339 aaKnown RBP15.66■□□□□ 0.1
USB1-202ENST00000423271 TTC31Q49AM3 519 aaPredicted RBP15.66■□□□□ 0.1
USB1-202ENST00000423271 RABGAP1LQ5R372 815 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 FKBP15Q5T1M5 1219 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 C9orf64Q5T6V5 341 aa15.66■□□□□ 0.1
USB1-202ENST00000423271 C14orf80Q86SX3 495 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms