RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 DGKGP49619 791 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 PTPN5P54829 565 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 AIF1P55008 147 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 HADHBP55084 474 aaKnown RBP9.56□□□□□ -0.88
PDGFC-202ENST00000422544 TAS2R40P59535 323 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 SLC25A11Q02978 314 aaKnown RBP9.56□□□□□ -0.88
PDGFC-202ENST00000422544 KIF5AQ12840 1032 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 FZD5Q13467 585 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 GEN1Q17RS7 908 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 SMTNL2Q2TAL5 461 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 C5orf22Q49AR2 442 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 BOLA3Q53S33 107 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 ALFQ53S48 1182 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 FSCBQ5H9T9 825 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 ACBD5Q5T8D3 534 aaPredicted RBP9.56□□□□□ -0.88
PDGFC-202ENST00000422544 CWF19L1Q69YN2 538 aaKnown RBP9.56□□□□□ -0.88
PDGFC-202ENST00000422544 RWDD4Q6NW29 188 aaKnown RBP9.56□□□□□ -0.88
PDGFC-202ENST00000422544 MFN1Q8IWA4 741 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 CCAR2Q8N163 923 aaKnown RBP9.56□□□□□ -0.88
PDGFC-202ENST00000422544 PHTF2Q8N3S3 785 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 PJA1Q8NG27 643 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 FIBINQ8TAL6 211 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 WFDC5Q8TCV5 224 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 HSPH1Q92598 858 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 EZH1Q92800 747 aaPredicted RBP9.56□□□□□ -0.88
PDGFC-202ENST00000422544 EXOC4Q96A65 974 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 SNRNP25Q9BV90 132 aaKnown RBP9.56□□□□□ -0.88
PDGFC-202ENST00000422544 SLC2A11Q9BYW1 496 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 KCNF1Q9H3M0 494 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 GOLPH3Q9H4A6 298 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 MPP6Q9NZW5 540 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 LCMT1Q9UIC8 334 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 AP4E1Q9UPM8 1137 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 HELZP42694 1942 aaKnown RBP9.56□□□□□ -0.88
PDGFC-202ENST00000422544 BAHCC1Q9P281 2608 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 IGLV3-10A0A075B6K4 115 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 A0A0A0MRY4 1105 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.55□□□□□ -0.88
PDGFC-202ENST00000422544 A0A1B0GVM2 712 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 MACROD2A1Z1Q3 448 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 TCAF2A6NFQ2 919 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 PRRT4C9JH25 899 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 K7EQS6 105 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 LUC7L3O95232 432 aaKnown RBP9.55□□□□□ -0.88
PDGFC-202ENST00000422544 TNNT1P13805 278 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 COMTP21964 271 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 HLA-FP30511 346 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 CD70P32970 193 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 GJC1P36383 396 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 SLC1A1P43005 524 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 CLCN5P51795 746 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 CDH4P55283 916 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 SEC13P55735 322 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 NRG1Q02297 640 aaPredicted RBP9.55□□□□□ -0.88
PDGFC-202ENST00000422544 CCDC173Q0VFZ6 552 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 ZNF177Q13360 481 aaPredicted RBP9.55□□□□□ -0.88
PDGFC-202ENST00000422544 CDH18Q13634 790 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 CCINQ13939 588 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 HADHQ16836 314 aaKnown RBP9.55□□□□□ -0.88
PDGFC-202ENST00000422544 PREPLQ4J6C6 727 aaPredicted RBP9.55□□□□□ -0.88
PDGFC-202ENST00000422544 ATP13A4Q4VNC1 1196 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 EMC10Q5UCC4 262 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 MANEALQ5VSG8 457 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 TTC39BQ5VTQ0 682 aaPredicted RBP9.55□□□□□ -0.88
PDGFC-202ENST00000422544 RNF43Q68DV7 783 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 TFAP2DQ7Z6R9 452 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 PSTKQ8IV42 348 aaKnown RBP9.55□□□□□ -0.88
PDGFC-202ENST00000422544 CCDC117Q8IWD4 279 aaPredicted RBP9.55□□□□□ -0.88
PDGFC-202ENST00000422544 SUGP1Q8IWZ8 645 aaKnown RBP9.55□□□□□ -0.88
PDGFC-202ENST00000422544 CCDC105Q8IYK2 499 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 TXLNBQ8N3L3 684 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 FBXL6Q8N531 539 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 TERB1Q8NA31 727 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 TPCN2Q8NHX9 752 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 TBC1D31Q96DN5 1066 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 LMLNQ96KR4 655 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 PPP1R9BQ96SB3 815 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 KCTD15Q96SI1 283 aaPredicted RBP9.55□□□□□ -0.88
PDGFC-202ENST00000422544 OSBPL6Q9BZF3 934 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 ZYG11BQ9C0D3 744 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.55□□□□□ -0.88
PDGFC-202ENST00000422544 ABCB8Q9NUT2 735 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 PPARGC1AQ9UBK2 798 aaKnown RBP9.55□□□□□ -0.88
PDGFC-202ENST00000422544 SLC27A6Q9Y2P4 619 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 ALG6Q9Y672 507 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 MYOFQ9NZM1 2061 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 CACNA1IQ9P0X4 2223 aa9.55□□□□□ -0.88
PDGFC-202ENST00000422544 TICRRQ7Z2Z1 1910 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 KIF26AQ9ULI4 1882 aaPredicted RBP9.54□□□□□ -0.88
PDGFC-202ENST00000422544 NCAM2O15394 837 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 SPOPO43791 374 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 CLDN11O75508 207 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 MOCS3O95396 460 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 CCDC175P0C221 793 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 RHOQP17081 205 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 AOC1P19801 751 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 EPHB2P29323 1055 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 CSKP41240 450 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 TNFRSF4P43489 277 aa9.54□□□□□ -0.88
PDGFC-202ENST00000422544 NUMBP49757 651 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms