RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 TBCBQ99426 244 aa22.61■■□□□ 1.21
TRAF4-204ENST00000422344 FUCA2Q9BTY2 467 aa22.61■■□□□ 1.21
TRAF4-204ENST00000422344 MKRN2Q9H000 416 aaKnown RBP22.61■■□□□ 1.21
TRAF4-204ENST00000422344 SIK2Q9H0K1 926 aa22.61■■□□□ 1.21
TRAF4-204ENST00000422344 TMEM245Q9H330 911 aa22.61■■□□□ 1.21
TRAF4-204ENST00000422344 RTN4Q9NQC3 1192 aaKnown RBP22.61■■□□□ 1.21
TRAF4-204ENST00000422344 METTL5Q9NRN9 209 aaKnown RBP22.61■■□□□ 1.21
TRAF4-204ENST00000422344 PLXND1Q9Y4D7 1925 aa22.61■■□□□ 1.21
TRAF4-204ENST00000422344 A0A1B0GVM2 712 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 TCAF2A6NFQ2 919 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 TEX33O43247 280 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 SERPINC1P01008 464 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 FERP16591 822 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 FLT3P36888 993 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 CXCR3P49682 368 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 OXCT1P55809 520 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 AUHQ13825 339 aaKnown RBP22.6■■□□□ 1.21
TRAF4-204ENST00000422344 OTUD1Q5VV17 481 aaPredicted RBP22.6■■□□□ 1.21
TRAF4-204ENST00000422344 RNF219Q5W0B1 726 aaPredicted RBP22.6■■□□□ 1.21
TRAF4-204ENST00000422344 METTL3Q86U44 580 aaKnown RBP22.6■■□□□ 1.21
TRAF4-204ENST00000422344 CIR1Q86X95 450 aaPredicted RBP22.6■■□□□ 1.21
TRAF4-204ENST00000422344 CACUL1Q86Y37 369 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 CCAR2Q8N163 923 aaKnown RBP22.6■■□□□ 1.21
TRAF4-204ENST00000422344 ZNF366Q8N895 744 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 OR2T3Q8NH03 318 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 NT5C3BQ969T7 300 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 PGAP3Q96FM1 320 aaPredicted RBP22.6■■□□□ 1.21
TRAF4-204ENST00000422344 LMLNQ96KR4 655 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 TKTL2Q9H0I9 626 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 FBRSQ9HAH7 460 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 SUN2Q9UH99 717 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 RALYQ9UKM9 306 aaKnown RBP22.6■■□□□ 1.21
TRAF4-204ENST00000422344 VANGL2Q9ULK5 521 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 HS3ST4Q9Y661 456 aa22.6■■□□□ 1.21
TRAF4-204ENST00000422344 KHNYNO15037 678 aaKnown RBP22.59■■□□□ 1.21
TRAF4-204ENST00000422344 PROS1P07225 676 aa22.59■■□□□ 1.21
TRAF4-204ENST00000422344 TFE3P19532 575 aaPredicted RBP22.59■■□□□ 1.21
TRAF4-204ENST00000422344 RDXP35241 583 aaKnown RBP22.59■■□□□ 1.21
TRAF4-204ENST00000422344 PTGER3P43115 390 aa22.59■■□□□ 1.21
TRAF4-204ENST00000422344 CAMK2GQ13555 558 aaPredicted RBP22.59■■□□□ 1.21
TRAF4-204ENST00000422344 SLC12A1Q13621 1099 aa22.59■■□□□ 1.21
TRAF4-204ENST00000422344 ARCQ7LC44 396 aa22.59■■□□□ 1.21
TRAF4-204ENST00000422344 DEFB119Q8N690 84 aa22.59■■□□□ 1.21
TRAF4-204ENST00000422344 CFAP57Q96MR6 1250 aa22.59■■□□□ 1.21
TRAF4-204ENST00000422344 PPP1R9BQ96SB3 815 aa22.59■■□□□ 1.21
TRAF4-204ENST00000422344 AGPAT1Q99943 283 aa22.59■■□□□ 1.21
TRAF4-204ENST00000422344 ARHGEF38Q9NXL2 777 aa22.59■■□□□ 1.21
TRAF4-204ENST00000422344 TMEM59LQ9UK28 342 aa22.59■■□□□ 1.21
TRAF4-204ENST00000422344 INTS6Q9UL03 887 aaKnown RBP22.59■■□□□ 1.21
TRAF4-204ENST00000422344 FAM208BQ5VWN6 2430 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.58■■□□□ 1.21
TRAF4-204ENST00000422344 PATE3B3GLJ2 98 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 ADCY5O95622 1261 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 CALB1P05937 261 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 UNGP13051 313 aaPredicted RBP22.58■■□□□ 1.21
TRAF4-204ENST00000422344 CD6P30203 668 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 GGCXP38435 758 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 COPAP53621 1224 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 CENPCQ03188 943 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 ZNF252P-AS1Q0IIN9 211 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 FOXC1Q12948 553 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 ZNF177Q13360 481 aaPredicted RBP22.58■■□□□ 1.21
TRAF4-204ENST00000422344 IQCB1Q15051 598 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 CLEC16AQ2KHT3 1053 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 PLEKHG6Q3KR16 790 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 SH3PXD2AQ5TCZ1 1133 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 LRRC31Q6UY01 552 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 PHLDB2Q86SQ0 1253 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 IGSF8Q969P0 613 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 PCDHB18PQ96TA0 734 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 CD93Q9NPY3 652 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 TMEM9BQ9NQ34 198 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 ITM2CQ9NQX7 267 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 ADAM22Q9P0K1 906 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 ERVW-1Q9UQF0 538 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 IGF2RP11717 2491 aa22.58■■□□□ 1.21
TRAF4-204ENST00000422344 GON4LQ3T8J9 2241 aa22.58■■□□□ 1.2
TRAF4-204ENST00000422344 MUC22E2RYF6 1773 aaPredicted RBP22.58■■□□□ 1.2
TRAF4-204ENST00000422344 C1QTNF9BB2RNN3 333 aa22.57■■□□□ 1.2
TRAF4-204ENST00000422344 SRPRAP08240 638 aaKnown RBP22.57■■□□□ 1.2
TRAF4-204ENST00000422344 C1QTNF9P0C862 333 aa22.57■■□□□ 1.2
TRAF4-204ENST00000422344 PDGFRAP16234 1089 aa22.57■■□□□ 1.2
TRAF4-204ENST00000422344 OXTRP30559 389 aa22.57■■□□□ 1.2
TRAF4-204ENST00000422344 ECT2LQ008S8 904 aa22.57■■□□□ 1.2
TRAF4-204ENST00000422344 ZNF33AQ06730 810 aa22.57■■□□□ 1.2
TRAF4-204ENST00000422344 ACBD5Q5T8D3 534 aaPredicted RBP22.57■■□□□ 1.2
TRAF4-204ENST00000422344 SYT12Q8IV01 421 aa22.57■■□□□ 1.2
TRAF4-204ENST00000422344 EMC1Q8N766 993 aa22.57■■□□□ 1.2
TRAF4-204ENST00000422344 ADAM33Q9BZ11 813 aa22.57■■□□□ 1.2
TRAF4-204ENST00000422344 CBX8Q9HC52 389 aa22.57■■□□□ 1.2
TRAF4-204ENST00000422344 PRSS16Q9NQE7 514 aa22.57■■□□□ 1.2
TRAF4-204ENST00000422344 USP36Q9P275 1121 aaKnown RBP22.57■■□□□ 1.2
TRAF4-204ENST00000422344 MYO6Q9UM54 1294 aa22.57■■□□□ 1.2
TRAF4-204ENST00000422344 CKAP5Q14008 2032 aa22.57■■□□□ 1.2
TRAF4-204ENST00000422344 ZZEF1O43149 2961 aa22.56■■□□□ 1.2
TRAF4-204ENST00000422344 A0A1W2PQC6 194 aa22.56■■□□□ 1.2
TRAF4-204ENST00000422344 CLDN11O75508 207 aa22.56■■□□□ 1.2
TRAF4-204ENST00000422344 SDC4P31431 198 aa22.56■■□□□ 1.2
TRAF4-204ENST00000422344 NNMTP40261 264 aa22.56■■□□□ 1.2
TRAF4-204ENST00000422344 TPMTP51580 245 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms