RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 MTSS1O43312 755 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 MOCS2O96007 188 aaPredicted RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 CKMP06732 381 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 UQCRHP07919 91 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 CHKAP35790 457 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 AVPR1AP37288 418 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 CDH4P55283 916 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 YBEYP58557 167 aaPredicted RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 CBLBQ13191 982 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 CUL1Q13616 776 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 PRKD1Q15139 912 aaPredicted RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 LLGL1Q15334 1064 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 RABGAP1LQ5R372 815 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 SYCE2Q6PIF2 218 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 ZNF783Q6ZMS7 281 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 C14orf80Q86SX3 495 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 CDKL3Q8IVW4 592 aaPredicted RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 IFT20Q8IY31 132 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 HNRNPLLQ8WVV9 542 aaKnown RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 TCEAL4Q96EI5 215 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 QKIQ96PU8 341 aaKnown RBP eCLIP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 SIK2Q9H0K1 926 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 PCDH9Q9HC56 1237 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 SAE1Q9UBE0 346 aaPredicted RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 DMGDHQ9UI17 866 aaKnown RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 MYO7AQ13402 2215 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 DENND4CQ5VZ89 1909 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 LEFTY2O00292 366 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 NRG2O14511 850 aaPredicted RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 TTI1O43156 1089 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 MFSD11O43934 449 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 CLDN11O75508 207 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 HEXIM1O94992 359 aaKnown RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 KCNA5P22460 613 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 IVDP26440 423 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 KCNJ1P48048 391 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 DYNLT1P63172 113 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 TNK2Q07912 1038 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 PPIDQ08752 370 aaKnown RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 USP4Q13107 963 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 TEAD2Q15562 447 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 RAP1GAP2Q684P5 730 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 SETD3Q86TU7 594 aaPredicted RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 DENND1CQ8IV53 801 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 ARHGAP12Q8IWW6 846 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 TFB1MQ8WVM0 346 aaKnown RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 VAT1Q99536 393 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 FERMT1Q9BQL6 677 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 PARD6BQ9BYG5 372 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 S1PR5Q9H228 398 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 PIDD1Q9HB75 910 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 TRPC7Q9HCX4 862 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 FAM114A2Q9NRY5 505 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 VANGL2Q9ULK5 521 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 ZNF148Q9UQR1 794 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 TBC1D30Q9Y2I9 924 aa14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 MRPS23Q9Y3D9 190 aaKnown RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 ZFP37Q9Y6Q3 630 aaPredicted RBP14.66□□□□□ -0.06
SHMT1P1-201ENST00000419974 TCF20Q9UGU0 1960 aaKnown RBP14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 A0A1B0GVM2 712 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 CCDC151A5D8V7 595 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 TCAF2A6NFQ2 919 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 C5orf60A6NFR6 353 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 SMAPO00193 183 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 GCATO75600 419 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 HMBSP08397 361 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 RHOXF2BP0C7M4 288 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 ITIH2P19823 946 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 CCNCP24863 283 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 SLC6A4P31645 630 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 GARSP41250 739 aaKnown RBP14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 BRD3Q15059 726 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 ELF2Q15723 593 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 ZNF77Q15935 545 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 P3H1Q32P28 736 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 PARP15Q460N3 678 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 RWDD4Q6NW29 188 aaKnown RBP14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 C1orf228Q6PIY5 440 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 NPNTQ6UXI9 565 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 TMC5Q6UXY8 1006 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 CCNI2Q6ZMN8 369 aaPredicted RBP14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 CHSY1Q86X52 802 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 NPWQ8N729 165 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 BBOF1Q8ND07 529 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 USP13Q92995 863 aaPredicted RBP14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 IGSF8Q969P0 613 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 RPRD1AQ96P16 312 aaPredicted RBP14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 RHOXF2Q9BQY4 288 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 CLEC1BQ9P126 229 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 WHRNQ9P202 907 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 TBC1D14Q9P2M4 693 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 HEY1Q9Y5J3 304 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 SNX10Q9Y5X0 201 aa14.65□□□□□ -0.06
SHMT1P1-201ENST00000419974 NOTCH4Q99466 2003 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 GRXCR2A6NFK2 248 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 CSPG5O95196 566 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 FSHRP23945 695 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 RBM10P98175 930 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms