RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 PLEKHG6Q3KR16 790 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 CAVIN1Q6NZI2 390 aaKnown RBP17■□□□□ 0.31
LINC00404-201ENST00000418660 SLC23A3Q6PIS1 610 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 TRIM72Q6ZMU5 477 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 SND1Q7KZF4 910 aaKnown RBP eCLIP17■□□□□ 0.31
LINC00404-201ENST00000418660 ARCQ7LC44 396 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 RABEPKQ7Z6M1 372 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 CEP76Q8TAP6 659 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 NUP205Q92621 2012 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 IGSF8Q969P0 613 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 HSPA12BQ96MM6 686 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 RPRD1AQ96P16 312 aaPredicted RBP17■□□□□ 0.31
LINC00404-201ENST00000418660 NUP58Q9BVL2 599 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 NUSAP1Q9BXS6 441 aaKnown RBP17■□□□□ 0.31
LINC00404-201ENST00000418660 ADAM33Q9BZ11 813 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 ARHGEF38Q9NXL2 777 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 TMEM59LQ9UK28 342 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 ERVW-1Q9UQF0 538 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 PAXBP1Q9Y5B6 917 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 HS3ST4Q9Y661 456 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 CACNA1AO00555 2505 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 CKAP5Q14008 2032 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 FAM170AA1A519 330 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 C4orf47A7E2U8 309 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 SMTNL1A8MU46 457 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 ADCY5O95622 1261 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 MMP8P22894 467 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 FLT3P36888 993 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 PLK1P53350 603 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 RPS14P62263 151 aaKnown RBP16.99■□□□□ 0.31
LINC00404-201ENST00000418660 ZBTB16Q05516 673 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 ARID5BQ14865 1188 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 DUOXA1Q1HG43 343 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 C5orf22Q49AR2 442 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 SYCP2LQ5T4T6 812 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 CIR1Q86X95 450 aaPredicted RBP16.99■□□□□ 0.31
LINC00404-201ENST00000418660 CACUL1Q86Y37 369 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 APCDD1Q8J025 514 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 CADM4Q8NFZ8 388 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 TBCBQ99426 244 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 TKTL2Q9H0I9 626 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 SIK2Q9H0K1 926 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 TMEM9BQ9NQ34 198 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 VANGL2Q9ULK5 521 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 SLC6A14Q9UN76 642 aa16.99■□□□□ 0.31
LINC00404-201ENST00000418660 SERPINF2P08697 491 aa16.98■□□□□ 0.31
LINC00404-201ENST00000418660 CTSOP43234 321 aaPredicted RBP16.98■□□□□ 0.31
LINC00404-201ENST00000418660 ECT2LQ008S8 904 aa16.98■□□□□ 0.31
LINC00404-201ENST00000418660 HNRNPA1L2Q32P51 320 aaKnown RBP16.98■□□□□ 0.31
LINC00404-201ENST00000418660 PPM1JQ5JR12 505 aa16.98■□□□□ 0.31
LINC00404-201ENST00000418660 WDR45BQ5MNZ6 344 aa16.98■□□□□ 0.31
LINC00404-201ENST00000418660 ACBD5Q5T8D3 534 aaPredicted RBP16.98■□□□□ 0.31
LINC00404-201ENST00000418660 RNF219Q5W0B1 726 aaPredicted RBP16.98■□□□□ 0.31
LINC00404-201ENST00000418660 CXorf57Q6NSI4 855 aaKnown RBP16.98■□□□□ 0.31
LINC00404-201ENST00000418660 BNIPLQ7Z465 357 aa16.98■□□□□ 0.31
LINC00404-201ENST00000418660 C14orf80Q86SX3 495 aa16.98■□□□□ 0.31
LINC00404-201ENST00000418660 DHX40Q8IX18 779 aaKnown RBP16.98■□□□□ 0.31
LINC00404-201ENST00000418660 RGL4Q8IZJ4 473 aa16.98■□□□□ 0.31
LINC00404-201ENST00000418660 PPP1R9BQ96SB3 815 aa16.98■□□□□ 0.31
LINC00404-201ENST00000418660 GPR174Q9BXC1 333 aa16.98■□□□□ 0.31
LINC00404-201ENST00000418660 MTG2Q9H4K7 406 aa16.98■□□□□ 0.31
LINC00404-201ENST00000418660 ANLNQ9NQW6 1124 aa16.98■□□□□ 0.31
LINC00404-201ENST00000418660 ITIH6Q6UXX5 1313 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.97■□□□□ 0.31
LINC00404-201ENST00000418660 TARSL2A2RTX5 802 aaKnown RBP16.97■□□□□ 0.31
LINC00404-201ENST00000418660 CDX4O14627 284 aaPredicted RBP16.97■□□□□ 0.31
LINC00404-201ENST00000418660 SIN3BO75182 1162 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 CLDN11O75508 207 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 DNTTP04053 509 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 CFIP05156 583 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 UNGP13051 313 aaPredicted RBP16.97■□□□□ 0.31
LINC00404-201ENST00000418660 PDGFRAP16234 1089 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 ENGP17813 658 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 MZF1P28698 734 aaPredicted RBP16.97■□□□□ 0.31
LINC00404-201ENST00000418660 GGCXP38435 758 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 IRAK1P51617 712 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 CENPCQ03188 943 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 SULT2A1Q06520 285 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 ZNF177Q13360 481 aaPredicted RBP16.97■□□□□ 0.31
LINC00404-201ENST00000418660 DAB2IPQ5VWQ8 1189 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 ZNF776Q68DI1 518 aaPredicted RBP16.97■□□□□ 0.31
LINC00404-201ENST00000418660 TRNP1Q6NT89 227 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 SLC30A5Q8TAD4 765 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 DNASE2BQ8WZ79 361 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 C1orf74Q96LT6 269 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 CFAP57Q96MR6 1250 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 PCDHB18PQ96TA0 734 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 PCED1AQ9H1Q7 454 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 RSPH9Q9H1X1 276 aaPredicted RBP16.97■□□□□ 0.31
LINC00404-201ENST00000418660 METTL5Q9NRN9 209 aaKnown RBP16.97■□□□□ 0.31
LINC00404-201ENST00000418660 SUSD2Q9UGT4 822 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 SLCO3A1Q9UIG8 710 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 DNAH14Q0VDD8 3507 aa16.97■□□□□ 0.31
LINC00404-201ENST00000418660 EDDM13A0A1B0GTR0 161 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 METTL12A8MUP2 240 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 TTC34A8MYJ7 566 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 I6L893 689 aaPredicted RBP16.96■□□□□ 0.31
LINC00404-201ENST00000418660 RNASEH1O60930 286 aaKnown RBP16.96■□□□□ 0.31
LINC00404-201ENST00000418660 ENDOD1O94919 500 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 RDXP35241 583 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms