RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 ARNTL2Q8WYA1 636 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 TTC17Q96AE7 1141 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 VWCEQ96DN2 955 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 STAMBPL1Q96FJ0 436 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 CFAP36Q96G28 342 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 SEC16BQ96JE7 1060 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 TEKT5Q96M29 485 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 HIPK3Q9H422 1215 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 RABEP2Q9H5N1 569 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 CATSPERBQ9H7T0 1116 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 KCNK9Q9NPC2 374 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 CASS4Q9NQ75 786 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 PRDM5Q9NQX1 630 aaPredicted RBP9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 GMIPQ9P107 970 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 PPARGC1AQ9UBK2 798 aaKnown RBP9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 MTRRQ9UBK8 725 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 RRP15Q9Y3B9 282 aaKnown RBP9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 SNX10Q9Y5X0 201 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 BACE2Q9Y5Z0 518 aa9.29□□□□□ -0.92
LINCMD1-201ENST00000418518 A0A1W2PPM1 405 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 SDR42E2A6NKP2 422 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 TBKBP1A7MCY6 615 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 PSMD3O43242 534 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 MSI1O43347 362 aaKnown RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 PQBP1O60828 265 aaKnown RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 INHBAP08476 426 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 DHRS4L1P0CG22 281 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 ALADP13716 330 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 PGAM1P18669 254 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 TAC1P20366 129 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 YWHAQP27348 245 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 GRIA1P42261 906 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 GPR15P49685 360 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 SERPINB9P50453 376 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 NEK3P51956 506 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 MLLT6P55198 1093 aaPredicted RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 CORO7P57737 925 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 RPL10AP62906 217 aaKnown RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 IL9RQ01113 521 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 RING1Q06587 406 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 TNK2Q07912 1038 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 NIPAL4Q0D2K0 466 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 IFRD2Q12894 506 aaPredicted RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 ZBTB17Q13105 803 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 SPARCL1Q14515 664 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 DDR2Q16832 855 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 RTP2Q5QGT7 225 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 SYCP2LQ5T4T6 812 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 PIK3R6Q5UE93 754 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 GKAP1Q5VSY0 366 aaPredicted RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 TTC39BQ5VTQ0 682 aaPredicted RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 SLC8B1Q6J4K2 584 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 CNKSR3Q6P9H4 555 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 RSPO2Q6UXX9 243 aaPredicted RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 TIFABQ6ZNK6 161 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 CPLX4Q7Z7G2 160 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 PRPF39Q86UA1 669 aaKnown RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 CACNA2D3Q8IZS8 1091 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 MPP5Q8N3R9 675 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 TTC9BQ8N6N2 239 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 PDCD7Q8N8D1 485 aaKnown RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 ANKRD42Q8N9B4 389 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 ATAD1Q8NBU5 361 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 CCNYQ8ND76 341 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 OVCA2Q8WZ82 227 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 RNF34Q969K3 372 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 MTBPQ96DY7 904 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 OXNAD1Q96HP4 312 aaPredicted RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 SCLYQ96I15 445 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 PPP1R2P1Q96PQ5 205 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 IL12RB2Q99665 862 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 TTPALQ9BTX7 342 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 MLPHQ9BV36 600 aaPredicted RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 CRISPLD1Q9H336 500 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 KIF9Q9HAQ2 790 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 RC3H2Q9HBD1 1191 aaKnown RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 TLR8Q9NR97 1041 aaKnown RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 SMYD2Q9NRG4 433 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 KLHL8Q9P2G9 620 aaPredicted RBP9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 HSFX1Q9UBD0 423 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 HCSTQ9UBK5 93 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 NR2E3Q9Y5X4 410 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 HS3ST4Q9Y661 456 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 FAM169AQ9Y6X4 670 aa9.28□□□□□ -0.92
LINCMD1-201ENST00000418518 CARNS1A5YM72 827 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 CXorf49A8MYA2 514 aaPredicted RBP9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 E9PAM4 449 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 KCNK1O00180 336 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 AP3B1O00203 1094 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 SNX3O60493 162 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 MAFKO60675 156 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 SPAG7O75391 227 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 SNRPAP09012 282 aaKnown RBP9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 CSH1P0DML2 217 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 CSH2P0DML3 217 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 CPB1P15086 417 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 RHOQP17081 205 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 CNTFP26441 200 aa9.27□□□□□ -0.93
LINCMD1-201ENST00000418518 TBX4P57082 545 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms