RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 VPS33AQ96AX1 596 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 PAFAH2Q99487 392 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 ABCC13Q9NSE7 274 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 NFASCO94856 1347 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 PREX1Q8TCU6 1659 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 BTN3A1O00481 513 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 ITGAXP20702 1163 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 CCND1P24385 295 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 SP3Q02447 781 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 PPATQ06203 517 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 RAET1GQ6H3X3 334 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 TMEM26Q6ZUK4 368 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 DENND6AQ8IWF6 608 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 SCAIQ8N9R8 606 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 SH3GL3Q99963 347 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 MID1IP1Q9NPA3 183 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 SLC9A8Q9Y2E8 581 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 H3BMM5 538 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 KRT75O95678 551 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 IFNGR2P38484 337 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 GSSP48637 474 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 SLC1A6P48664 564 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 AQP5P55064 265 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 FAM45BPQ6NSW5 357 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 BTN2A1Q7KYR7 527 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 GPSM1Q86YR5 675 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 CATSPER2Q96P56 530 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 A1CFQ9NQ94 594 aaKnown RBP11.43□□□□□ -0.58
PTCH1-205ENST00000418258 NUDT5Q9UKK9 219 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 SHOC2Q9UQ13 582 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 GUCY1B2O75343 617 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 CRABP2P29373 138 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 VGLL4Q14135 290 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 ARMCX4Q5H9R4 360 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 SERPINA13PQ6UXR4 307 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 ZNF621Q6ZSS3 439 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 SV2AQ7L0J3 742 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 ZNF557Q8N988 423 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-205ENST00000418258 ARL15Q9NXU5 204 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 ZDHHC9Q9Y397 364 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 SF3B1O75533 1304 aaKnown RBP eCLIP11.43□□□□□ -0.584e-7■■■■■ 133.7
PTCH1-205ENST00000418258 MYH7P12883 1935 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 PRMT3O60678 531 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 C4BPBP20851 252 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 INHBEP58166 350 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 SPANXN3Q5MJ09 141 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 FIBCD1Q8N539 461 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 CASKIN2Q8WXE0 1202 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 ABCG4Q9H172 646 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 EPS8L2Q9H6S3 715 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 RNF19AQ9NV58 838 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 MGAT1P26572 445 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 CLK3P49761 638 aaKnown RBP11.43□□□□□ -0.58
PTCH1-205ENST00000418258 GJC2Q5T442 439 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-205ENST00000418258 KLHL24Q6TFL4 600 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-205ENST00000418258 SCUBE1Q8IWY4 988 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 CXorf40BQ96DE9 158 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 SEPHS2Q99611 448 aa11.43□□□□□ -0.58
PTCH1-205ENST00000418258 NRCAMQ92823 1304 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 SCAMP3O14828 347 aaKnown RBP11.42□□□□□ -0.58
PTCH1-205ENST00000418258 MYL12AP19105 171 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 AMPD1P23109 780 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 COPZ1P61923 177 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 IL5RAQ01344 420 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 PAGE2BQ5JRK9 111 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 C3orf67Q6ZVT6 689 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 DENND1CQ8IV53 801 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 ZSCAN18Q8TBC5 510 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-205ENST00000418258 USP6NLQ92738 828 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 PROX1Q92786 737 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 PABPC3Q9H361 631 aaKnown RBP11.42□□□□□ -0.58
PTCH1-205ENST00000418258 OSGEPQ9NPF4 335 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.42□□□□□ -0.58
PTCH1-205ENST00000418258 VTI1BQ9UEU0 232 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 HAO1Q9UJM8 370 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 DIP2BQ9P265 1576 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 GZMAP12544 262 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 TLX1P31314 330 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-205ENST00000418258 CCZ1BP86790 482 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 CCZ1P86791 482 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-205ENST00000418258 DEFB115Q30KQ5 88 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 CCDC153Q494R4 210 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 FAM98BQ52LJ0 330 aaKnown RBP11.42□□□□□ -0.58
PTCH1-205ENST00000418258 FAM20CQ8IXL6 584 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 IZUMO1Q8IYV9 350 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 HGH1Q9BTY7 390 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 C2orf49Q9BVC5 232 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-205ENST00000418258 POLR1EQ9GZS1 481 aaKnown RBP11.42□□□□□ -0.58
PTCH1-205ENST00000418258 MCM8Q9UJA3 840 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 SLC25A12O75746 678 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 LBPP18428 481 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 GPR1P46091 355 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 ZNF470Q6ECI4 717 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 LRRC74BQ6ZQY2 392 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 HTR3CQ8WXA8 447 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 MRPL39Q9NYK5 338 aaKnown RBP11.42□□□□□ -0.58
PTCH1-205ENST00000418258 DUSP12Q9UNI6 340 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 STARD13Q9Y3M8 1113 aa11.42□□□□□ -0.58
PTCH1-205ENST00000418258 MGAT5Q09328 741 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms