RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 CFBP00751 764 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 YBX3P16989 372 aaKnown RBP eCLIP8.2□□□□□ -1.14e-7■■■■□ 22.3
HMGXB4-202ENST00000418170 MAGEA3P43357 314 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 ITGADQ13349 1161 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 OXA1LQ15070 435 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 KCNJ8Q15842 424 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 INSCQ1MX18 579 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 LMBRD2Q68DH5 695 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 TTC33Q6PID6 262 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 TMEM26Q6ZUK4 368 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 ZSCAN18Q8TBC5 510 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 GMCL1Q96IK5 515 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 UHRF1Q96T88 793 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 EBNA1BP2Q99848 306 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 CTRCQ99895 268 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 PSD2Q9BQI7 771 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 SH2D3AQ9BRG2 576 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 FAM213AQ9BRX8 229 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 TRPV6Q9H1D0 765 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 NARFQ9UHQ1 456 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 NOX1Q9Y5S8 564 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 WDR64B1ANS9 1081 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 DDX39AO00148 427 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 TRIM38O00635 465 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 DYNC1LI2O43237 492 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 KDM1AO60341 852 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 TADA2AO75478 443 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 RPS6KA4O75676 772 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 LDHAP00338 332 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 C4BPAP04003 597 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 SLURP2P0DP57 97 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 ADSLP30566 484 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 NPTX2P47972 431 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 RHDQ02161 417 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 NFATC3Q12968 1075 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 HERC3Q15034 1050 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 SIAH1Q8IUQ4 282 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 CPSF7Q8N684 471 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 CMASQ8NFW8 434 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 PTCD2Q8WV60 388 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 SIGLEC10Q96LC7 697 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 ZNF641Q96N77 438 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 MROQ9BYG7 248 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 MOCS1Q9NZB8 636 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 ARHGAP28Q9P2N2 729 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 C9IYK1 514 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 DGKIO75912 1065 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 VNN1O95497 513 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 HLA-DOAP06340 250 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 APRTP07741 180 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 MYF6P23409 242 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 TBXAS1P24557 533 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 RFC1P35251 1148 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 GNL1P36915 607 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 IREB2P48200 963 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 ZNF132P52740 706 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 PSMC1P62191 440 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 GTF2IP78347 998 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 PRAMEP78395 509 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 ART3Q13508 389 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 NDUFA5Q16718 116 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 SHROOM1Q2M3G4 852 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 SLC9A4Q6AI14 798 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 PPP4R4Q6NUP7 873 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 RSBN1LQ6PCB5 846 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 NPNTQ6UXI9 565 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 FRA10AC1Q70Z53 315 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 IGFN1Q86VF2 1251 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 KCTD6Q8NC69 237 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 TMEM35BQ8NCS4 154 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 FAM156AQ8NDB6 213 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 TOP1MTQ969P6 601 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 RTP4Q96DX8 246 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 C1orf50Q9BV19 199 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 ZNF385DQ9H6B1 395 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 EFCAB1Q9HAE3 211 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 GPRC5DQ9NZD1 345 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 TMEM216Q9P0N5 145 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 SUCOQ9UBS9 1254 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 PCDHA11Q9Y5I1 949 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 SNX13Q9Y5W8 968 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 COL4A5P29400 1685 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 GCATO75600 419 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 STAM2O75886 525 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 VAPBO95292 243 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 HSPA4LO95757 839 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 TCN1P20061 433 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 MX2P20592 715 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 PCYT1AP49585 367 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 GNA12Q03113 381 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 LSM12Q3MHD2 195 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 CYS1Q717R9 158 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 KIAA0319LQ8IZA0 1049 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 SIX6OS1Q8N1H7 587 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 MCUQ8NE86 351 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 SLCO4A1Q96BD0 722 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 DUS3LQ96G46 650 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 NGLY1Q96IV0 654 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 CNDP2Q96KP4 475 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 NAA50Q9GZZ1 169 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms