RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 NETO1Q8TDF5 533 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 ATG4AQ8WYN0 398 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 RSPRY1Q96DX4 576 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 SPATA17Q96L03 361 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 TRIM31Q9BZY9 425 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 LRRC19Q9H756 370 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 PCDH18Q9HCL0 1135 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 ARFGAP3Q9NP61 516 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 ASAH2Q9NR71 780 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 COMMD8Q9NX08 183 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 AFF4Q9UHB7 1163 aaKnown RBP13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 PCYOX1Q9UHG3 505 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 MAGED2Q9UNF1 606 aaPredicted RBP13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 EFR3BQ9Y2G0 817 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 R3HDM2Q9Y2K5 976 aaKnown RBP13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 HEPACAM2A8MVW5 462 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 CHURC1-FNTBB4DL54 471 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 ARNTLO00327 626 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 SLC30A4O14863 429 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 HRO43593 1189 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 ENDOD1O94919 500 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 ECEL1O95672 775 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 GAS8O95995 478 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 ALDH1A3P47895 512 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 FNTBP49356 437 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 CLCN6P51797 869 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 EPHA5P54756 1037 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 KLF1Q13351 362 aaPredicted RBP13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 HLTFQ14527 1009 aaKnown RBP eCLIP13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 CYP4V2Q6ZWL3 525 aaPredicted RBP13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 MFSD6LQ8IWD5 586 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 ATL2Q8NHH9 583 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 SHKBP1Q8TBC3 707 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 NT5C3BQ969T7 300 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 FAM118BQ9BPY3 351 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 TRIM51Q9BSJ1 452 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 ADAM33Q9BZ11 813 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 TRPV4Q9HBA0 871 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 SEMA4GQ9NTN9 838 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 GMIPQ9P107 970 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 FZD10Q9ULW2 581 aa13.6□□□□□ -0.23
HLA-DMB-258ENST00000418107 SLC38A8A6NNN8 435 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 H3BRJ5 948 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 APOL1O14791 398 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 DAPK3O43293 454 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 VNN2O95498 520 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 L1CAMP32004 1257 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 TNNT3P45378 269 aaPredicted RBP13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 SOX9P48436 509 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 USP46P62068 366 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 CA9Q16790 459 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 ST3GAL2Q16842 350 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 ANKRD20A8PQ5CZ79 823 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 HEATR6Q6AI08 1181 aaKnown RBP13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 TTC27Q6P3X3 843 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 CCNI2Q6ZMN8 369 aaPredicted RBP13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 PRR23CQ6ZRP0 262 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 Q6ZS52 159 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 BBS12Q6ZW61 710 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 BEND5Q7L4P6 421 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 BHLHA9Q7RTU4 235 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 JAMLQ86YT9 394 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 PSTKQ8IV42 348 aaKnown RBP13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 YAF2Q8IY57 180 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 SPEM1Q8N4L4 309 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 LEMD2Q8NC56 503 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 CSGALNACT1Q8TDX6 532 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 DQX1Q8TE96 717 aaKnown RBP13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 CASKIN2Q8WXE0 1202 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 RNF157Q96PX1 679 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 KCTD15Q96SI1 283 aaPredicted RBP13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 FRMD8P1Q9BZ68 369 aaPredicted RBP13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 DPH5Q9H2P9 285 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 CRISPLD1Q9H336 500 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 WDCPQ9H6R7 721 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 TLR8Q9NR97 1041 aaKnown RBP13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 FAM114A2Q9NRY5 505 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 PIGVQ9NUD9 493 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 ZNF148Q9UQR1 794 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 YIPF1Q9Y548 306 aa13.59□□□□□ -0.23
HLA-DMB-258ENST00000418107 A0A1W2PRU2 124 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 ESYT3A0FGR9 886 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 ZSCAN5CA6NGD5 496 aaPredicted RBP13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 K7ESF4 209 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 MCF2LO15068 1137 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 CREB3O43889 395 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 GDF9O60383 454 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 LRP3O75074 770 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 ZFXP17010 805 aaPredicted RBP13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 ADRA1BP35368 520 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 PTGIRP43119 386 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 PSEN1P49768 467 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 ARSEP51690 589 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 KPNA1P52294 538 aaPredicted RBP13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 AIF1P55008 147 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 ADCY2Q08462 1091 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 TAF10Q12962 218 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 CUL1Q13616 776 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 BYSLQ13895 437 aaKnown RBP13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 VEPH1Q14D04 833 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms