RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ING5Q8WYH8 240 aa10.27□□□□□ -0.76
DDB1-202ENST00000414411 SNF8Q96H20 258 aa10.27□□□□□ -0.76
DDB1-202ENST00000414411 NECTIN4Q96NY8 510 aa10.27□□□□□ -0.76
DDB1-202ENST00000414411 SERPINB11Q96P15 392 aa10.27□□□□□ -0.76
DDB1-202ENST00000414411 CCT8L2Q96SF2 557 aa10.27□□□□□ -0.76
DDB1-202ENST00000414411 TSPYL1Q9H0U9 437 aa10.27□□□□□ -0.76
DDB1-202ENST00000414411 POMKQ9H5K3 350 aa10.27□□□□□ -0.76
DDB1-202ENST00000414411 CNOT10Q9H9A5 744 aaKnown RBP10.27□□□□□ -0.76
DDB1-202ENST00000414411 TRPC7Q9HCX4 862 aa10.27□□□□□ -0.76
DDB1-202ENST00000414411 HOMER3Q9NSC5 361 aa10.27□□□□□ -0.76
DDB1-202ENST00000414411 TMEM51Q9NW97 253 aa10.27□□□□□ -0.76
DDB1-202ENST00000414411 DDIT4Q9NX09 232 aa10.27□□□□□ -0.76
DDB1-202ENST00000414411 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.27□□□□□ -0.76
DDB1-202ENST00000414411 GDE1Q9NZC3 331 aa10.27□□□□□ -0.76
DDB1-202ENST00000414411 FEZ2Q9UHY8 353 aaPredicted RBP10.27□□□□□ -0.76
DDB1-202ENST00000414411 TLR6Q9Y2C9 796 aa10.27□□□□□ -0.76
DDB1-202ENST00000414411 R3HDM2Q9Y2K5 976 aaKnown RBP10.27□□□□□ -0.76
DDB1-202ENST00000414411 HBS1LQ9Y450 684 aaKnown RBP10.27□□□□□ -0.76
DDB1-202ENST00000414411 ATXN2Q99700 1313 aaKnown RBP10.27□□□□□ -0.77
DDB1-202ENST00000414411 TRAV19A0A0A6YYK7 116 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 KCNU1A8MYU2 1149 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 E7EVH7 732 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 I6L893 689 aaPredicted RBP10.27□□□□□ -0.77
DDB1-202ENST00000414411 MSI1O43347 362 aaKnown RBP10.27□□□□□ -0.77
DDB1-202ENST00000414411 RNF8O76064 485 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 TCF4P15884 667 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 ITIH2P19823 946 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 MIPP30301 263 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 KPNA1P52294 538 aaPredicted RBP10.27□□□□□ -0.77
DDB1-202ENST00000414411 COG7P83436 770 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 DEUP1Q05D60 604 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 NME3Q13232 169 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 TRIP4Q15650 581 aaPredicted RBP10.27□□□□□ -0.77
DDB1-202ENST00000414411 CDO1Q16878 200 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 CYP4V2Q6ZWL3 525 aaPredicted RBP10.27□□□□□ -0.77
DDB1-202ENST00000414411 TRMT10CQ7L0Y3 403 aaKnown RBP10.27□□□□□ -0.77
DDB1-202ENST00000414411 C10orf67Q8IYJ2 551 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 FCRL2Q96LA5 508 aaPredicted RBP10.27□□□□□ -0.77
DDB1-202ENST00000414411 NCAPGQ9BPX3 1015 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 OSBPL8Q9BZF1 889 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 PPANQ9NQ55 473 aaKnown RBP10.27□□□□□ -0.77
DDB1-202ENST00000414411 ANLNQ9NQW6 1124 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 GKN1Q9NS71 199 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 ARHGAP26Q9UNA1 814 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 USTQ9Y2C2 406 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 FAM169AQ9Y6X4 670 aa10.27□□□□□ -0.77
DDB1-202ENST00000414411 HELZP42694 1942 aaKnown RBP10.26□□□□□ -0.77
DDB1-202ENST00000414411 SLC12A8A0AV02 714 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 ANKRD65E5RJM6 399 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 MBTPS2O43462 519 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 GREM1O60565 184 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 CKMP06732 381 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 MBL2P11226 248 aaPredicted RBP10.26□□□□□ -0.77
DDB1-202ENST00000414411 RDXP35241 583 aaKnown RBP10.26□□□□□ -0.77
DDB1-202ENST00000414411 KCNQ1P51787 676 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 SMAD4Q13485 552 aaKnown RBP10.26□□□□□ -0.77
DDB1-202ENST00000414411 PPP2R5DQ14738 602 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 SKIV2LQ15477 1246 aaKnown RBP10.26□□□□□ -0.77
DDB1-202ENST00000414411 CCNG2Q16589 344 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 LEXMQ3ZCV2 418 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 ZC3H12AQ5D1E8 599 aaKnown RBP10.26□□□□□ -0.77
DDB1-202ENST00000414411 C6orf118Q5T5N4 469 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 ANKS1BQ7Z6G8 1248 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 CCDC25Q86WR0 208 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 SPATS2Q86XZ4 545 aaKnown RBP10.26□□□□□ -0.77
DDB1-202ENST00000414411 ARID3BQ8IVW6 561 aaPredicted RBP10.26□□□□□ -0.77
DDB1-202ENST00000414411 ATL2Q8NHH9 583 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 USP13Q92995 863 aaPredicted RBP10.26□□□□□ -0.77
DDB1-202ENST00000414411 CCDC114Q96M63 670 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 MYADMQ96S97 322 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 HEMGNQ9BXL5 484 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 NACA2Q9H009 215 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 TRPV4Q9HBA0 871 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 TDP1Q9NUW8 608 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 CDH7Q9ULB5 785 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 CCL26Q9Y258 94 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 NEU2Q9Y3R4 380 aa10.26□□□□□ -0.77
DDB1-202ENST00000414411 NUP210Q8TEM1 1887 aaPredicted RBP10.26□□□□□ -0.77
DDB1-202ENST00000414411 GMNCA6NCL1 334 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 RGS16O15492 202 aaPredicted RBP10.25□□□□□ -0.77
DDB1-202ENST00000414411 STC2O76061 302 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 PRAMEF12O95522 483 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 AGTP01019 485 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 KLKB1P03952 638 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 LAMP2P13473 410 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 TCF3P15923 654 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 IL1R2P27930 398 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 ADRA1BP35368 520 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 GJC1P36383 396 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 AVPR1AP37288 418 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 SSR1P43307 286 aaKnown RBP10.25□□□□□ -0.77
DDB1-202ENST00000414411 MAGEA9P43362 315 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 TBX4P57082 545 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 SLC25A11Q02978 314 aaKnown RBP10.25□□□□□ -0.77
DDB1-202ENST00000414411 CAV1Q03135 178 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 FAM78AQ5JUQ0 283 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 TXNRD3NBQ6F5E7 133 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 GET4Q7L5D6 327 aaPredicted RBP10.25□□□□□ -0.77
DDB1-202ENST00000414411 FAM131BQ86XD5 332 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 MAFAQ8NHW3 353 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms