RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 IGFBP2P18065 325 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 GSTM2P28161 218 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 HNF1BP35680 557 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 RPS6KA3P51812 740 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 MVDP53602 400 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 DRG2P55039 364 aaKnown RBP5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 ARF3P61204 181 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 CYP4F2P78329 520 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 ARF1P84077 181 aaKnown RBP5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 DCTN2Q13561 401 aaKnown RBP5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 AP5B1Q2VPB7 878 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 LSM12Q3MHD2 195 aaKnown RBP5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 GXYLT1Q4G148 440 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 AARS2Q5JTZ9 985 aaKnown RBP5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 TMEM65Q6PI78 240 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 C16orf54Q6UWD8 224 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 TTLL10Q6ZVT0 673 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 RASAL3Q86YV0 1011 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 SCN4BQ8IWT1 228 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 NGEFQ8N5V2 710 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 ENDOVQ8N8Q3 282 aaKnown RBP5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 TERB1Q8NA31 727 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 ADPRHL1Q8NDY3 354 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 TNIP2Q8NFZ5 429 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 NFKBIDQ8NI38 313 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 SH3KBP1Q96B97 665 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 CENPOQ9BU64 300 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 ABHD14AQ9BUJ0 271 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 HAUS2Q9NVX0 235 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 ASNSD1Q9NWL6 643 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 TAS2R10Q9NYW0 307 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 CLIC5Q9NZA1 410 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 MAST3O60307 1309 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 SALL3Q9BXA9 1300 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 DSCR3O14972 297 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 CCNT1O60563 726 aaKnown RBP5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 MT-CO3P00414 261 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 URODP06132 367 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 PKMP14618 531 aaKnown RBP5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 CD72P21854 359 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 EPHA8P29322 1005 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 STAT1P42224 750 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 AVPR1BP47901 424 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 CTSWP56202 376 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 NUCB1Q02818 461 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 FOXE3Q13461 319 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 FAM153CQ494X1 144 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 SNX30Q5VWJ9 437 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 SERPINA13PQ6UXR4 307 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 DCDC5Q6ZRR9 648 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 CCDC129Q6ZRS4 1044 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 RNF144BQ7Z419 303 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 BCDIN3DQ7Z5W3 292 aaKnown RBP5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 MON1AQ86VX9 555 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 TMEM200AQ86VY9 491 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 ADGRF3Q8IZF5 1079 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 METTL6Q8TCB7 284 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 NOC3LQ8WTT2 800 aaKnown RBP5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 NCSTNQ92542 709 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 KAZALD1Q96I82 304 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 TREX2Q9BQ50 279 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 NUDT16L1Q9BRJ7 211 aaKnown RBP5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 RNF26Q9BY78 433 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 TRIM2Q9C040 744 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 TTC12Q9H892 705 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 SEMA4BQ9NPR2 832 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 EIF2B3Q9NR50 452 aaKnown RBP5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 PCDHB16Q9NRJ7 776 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 SLC22A11Q9NSA0 550 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 BEX4Q9NWD9 120 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 ZDHHC7Q9NXF8 308 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 PPP1R14DQ9NXH3 145 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 SLC25A10Q9UBX3 287 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 GPR34Q9UPC5 381 aa5.2□□□□□ -1.58
HMGB3P31-201ENST00000413333 AP3D1O14617 1153 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 TCERG1O14776 1098 aaKnown RBP5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 PER2O15055 1255 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 GCATO75600 419 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 CNTN5O94779 1100 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 ESRRBO95718 433 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 ADH4P08319 380 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 CYP2D6P10635 497 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 ADRA1BP35368 520 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 ARL3P36405 182 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 PLA2G5P39877 138 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 MPLP40238 635 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 RGS2P41220 211 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 PTP4A2Q12974 167 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 IL13RA2Q14627 380 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 KCNB1Q14721 858 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 MEA1Q16626 185 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 PRICKLE4Q2TBC4 344 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 ZNF766Q5HY98 468 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 FNDC7Q5VTL7 733 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 KRBA2Q6ZNG9 492 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 SLC29A4Q7RTT9 530 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 ZNF804AQ7Z570 1209 aa5.19□□□□□ -1.58
HMGB3P31-201ENST00000413333 VRK3Q8IV63 474 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms