RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 ISL2Q96A47 359 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 SLC9A7Q96T83 725 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 FERMT1Q9BQL6 677 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 DNAI2Q9GZS0 605 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 STN1Q9H668 368 aaKnown RBP16.28■□□□□ 0.2
HOXD3-202ENST00000410016 LRRC4Q9HBW1 653 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 COPG2Q9UBF2 871 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 SLC7A8Q9UHI5 535 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 PDCD11Q14690 1871 aaKnown RBP16.28■□□□□ 0.2
HOXD3-202ENST00000410016 PTGESO14684 152 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 TREHO43280 583 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 ERCC2P18074 760 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 TYK2P29597 1187 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 LRPAP1P30533 357 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 TKTL1P51854 596 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 MUM1Q2TAK8 710 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 SPANXN3Q5MJ09 141 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 PRAMEF19Q5SWL8 479 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 LRRC74BQ6ZQY2 392 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 NET1Q7Z628 596 aaPredicted RBP16.28■□□□□ 0.2
HOXD3-202ENST00000410016 ULK2Q8IYT8 1036 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 MICAL1Q8TDZ2 1067 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 PANX3Q96QZ0 392 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 CPNE1Q99829 537 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 ZNF358Q9NW07 568 aa16.28■□□□□ 0.2
HOXD3-202ENST00000410016 CCL15-CCL14A0A0B4J2E2 113 aa16.27■□□□□ 0.2
HOXD3-202ENST00000410016 EIF4E1BA6NMX2 242 aaKnown RBP16.27■□□□□ 0.2
HOXD3-202ENST00000410016 SKAP2O75563 359 aaPredicted RBP16.27■□□□□ 0.2
HOXD3-202ENST00000410016 GRK2P25098 689 aa16.27■□□□□ 0.2
HOXD3-202ENST00000410016 GTF2A2P52657 109 aa16.27■□□□□ 0.2
HOXD3-202ENST00000410016 ACTR3P61158 418 aa16.27■□□□□ 0.2
HOXD3-202ENST00000410016 CCL15Q16663 113 aa16.27■□□□□ 0.2
HOXD3-202ENST00000410016 DNAL1Q4LDG9 190 aa16.27■□□□□ 0.2
HOXD3-202ENST00000410016 GRTP1Q5TC63 336 aa16.27■□□□□ 0.2
HOXD3-202ENST00000410016 C9orf131Q5VYM1 1079 aa16.27■□□□□ 0.2
HOXD3-202ENST00000410016 RASSF3Q86WH2 238 aa16.27■□□□□ 0.2
HOXD3-202ENST00000410016 EGFL6Q8IUX8 553 aa16.27■□□□□ 0.2
HOXD3-202ENST00000410016 STMN2Q93045 179 aa16.27■□□□□ 0.2
HOXD3-202ENST00000410016 THTPAQ9BU02 230 aa16.27■□□□□ 0.2
HOXD3-202ENST00000410016 ZNF212Q9UDV6 495 aa16.27■□□□□ 0.2
HOXD3-202ENST00000410016 WASF2Q9Y6W5 498 aa16.27■□□□□ 0.2
HOXD3-202ENST00000410016 ZCWPW2A0A1B0GU75 182 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 YJEFN3A6XGL0 299 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 USP12O75317 370 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 AP2A1O95782 977 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 C6orf222P0C671 652 aaPredicted RBP16.27■□□□□ 0.19
HOXD3-202ENST00000410016 RABGGTBP53611 331 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 MAP3K7CLP57077 242 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 SCAPQ12770 1279 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 MFSD10Q14728 455 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 KCTD11Q693B1 232 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 DPY19L2Q6NUT2 758 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 SIX6OS1Q8N1H7 587 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 ADAM32Q8TC27 787 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 NTAN1Q96AB6 310 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 AGAP3Q96P47 875 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 OSBPL1AQ9BXW6 950 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 CRTAC1Q9NQ79 661 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 SNX15Q9NRS6 342 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 PNPOQ9NVS9 261 aa16.27■□□□□ 0.19
HOXD3-202ENST00000410016 FAM163BP0C2L3 166 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 ALOX15P16050 662 aaPredicted RBP16.26■□□□□ 0.19
HOXD3-202ENST00000410016 HARS2P49590 506 aaKnown RBP16.26■□□□□ 0.19
HOXD3-202ENST00000410016 IDH3AP50213 366 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 RIPOR1Q6ZS17 1223 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 CMC1Q7Z7K0 106 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 PLD6Q8N2A8 252 aaKnown RBP16.26■□□□□ 0.19
HOXD3-202ENST00000410016 DCLK2Q8N568 766 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 NPWQ8N729 165 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 SLC7A14Q8TBB6 771 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 ZFP42Q96MM3 310 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 PPP1R10Q96QC0 940 aaKnown RBP16.26■□□□□ 0.19
HOXD3-202ENST00000410016 RBBP8Q99708 897 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 ULBP1Q9BZM6 244 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 LRRC40Q9H9A6 602 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 KRT82Q9NSB4 513 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 TMEM30AQ9NV96 361 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 KLHL8Q9P2G9 620 aaPredicted RBP16.26■□□□□ 0.19
HOXD3-202ENST00000410016 APOBEC2Q9Y235 224 aaKnown RBP16.26■□□□□ 0.19
HOXD3-202ENST00000410016 TSC2P49815 1807 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 ZNF638Q14966 1978 aaKnown RBP16.26■□□□□ 0.19
HOXD3-202ENST00000410016 A0A088AWK7 358 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 HAS3O00219 553 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 SIN3BO75182 1162 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 CD68P34810 354 aaPredicted RBP16.26■□□□□ 0.19
HOXD3-202ENST00000410016 HCAR3P49019 387 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 AIF1P55008 147 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 DAOAP59103 153 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 PPIDQ08752 370 aaKnown RBP16.26■□□□□ 0.19
HOXD3-202ENST00000410016 TRMT5Q32P41 509 aaKnown RBP16.26■□□□□ 0.19
HOXD3-202ENST00000410016 CAPRIN2Q6IMN6 1127 aaKnown RBP16.26■□□□□ 0.19
HOXD3-202ENST00000410016 FSTL4Q6MZW2 842 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 PLEKHH3Q7Z736 793 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 MYLK4Q86YV6 388 aaPredicted RBP16.26■□□□□ 0.19
HOXD3-202ENST00000410016 LMNTD2Q8IXW0 634 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 SPDL1Q96EA4 605 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 AGAP2Q99490 1192 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 CASS4Q9NQ75 786 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 TXNDC16Q9P2K2 825 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 FBXW11Q9UKB1 542 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms