RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 DAAM1Q9Y4D1 1078 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 NUMA1Q14980 2115 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 ASLP04424 464 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 ACADMP11310 421 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 MZF1P28698 734 aaPredicted RBP18.27■□□□□ 0.52
LSM5-204ENST00000409909 HOXD12P35452 270 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 STAT1P42224 750 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 NUMBP49757 651 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 SULT1E1P49888 294 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 RPS14P62263 151 aaKnown RBP18.27■□□□□ 0.52
LSM5-204ENST00000409909 PLEKHG6Q3KR16 790 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 SLC25A52Q3SY17 297 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 PPM1JQ5JR12 505 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 RABGAP1LQ5R372 815 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 CXorf57Q6NSI4 855 aaKnown RBP18.27■□□□□ 0.52
LSM5-204ENST00000409909 CAVIN1Q6NZI2 390 aaKnown RBP18.27■□□□□ 0.52
LSM5-204ENST00000409909 SLC23A3Q6PIS1 610 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 DHX40Q8IX18 779 aaKnown RBP18.27■□□□□ 0.52
LSM5-204ENST00000409909 NEK11Q8NG66 645 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 PGAP3Q96FM1 320 aaPredicted RBP18.27■□□□□ 0.52
LSM5-204ENST00000409909 PCMTD1Q96MG8 357 aaPredicted RBP18.27■□□□□ 0.52
LSM5-204ENST00000409909 RPRD1AQ96P16 312 aaPredicted RBP18.27■□□□□ 0.52
LSM5-204ENST00000409909 PCDHB18PQ96TA0 734 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 GPR174Q9BXC1 333 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 TKTL2Q9H0I9 626 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 WDCPQ9H6R7 721 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 FSCN3Q9NQT6 498 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 ARHGEF38Q9NXL2 777 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 SUN2Q9UH99 717 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 SLCO3A1Q9UIG8 710 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 VANGL2Q9ULK5 521 aa18.27■□□□□ 0.52
LSM5-204ENST00000409909 A0A1B0GVM2 712 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 TCAF2A6NFQ2 919 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 TTC34A8MYJ7 566 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 PDGFRAP16234 1089 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 MMP8P22894 467 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 MAOBP27338 520 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 OXTRP30559 389 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 DPP6P42658 865 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 ECT2LQ008S8 904 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 DUOXA1Q1HG43 343 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 HNRNPA1L2Q32P51 320 aaKnown RBP18.26■□□□□ 0.51
LSM5-204ENST00000409909 C5orf22Q49AR2 442 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 ARTNQ5T4W7 220 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 TTC39BQ5VTQ0 682 aaPredicted RBP18.26■□□□□ 0.51
LSM5-204ENST00000409909 BNIPLQ7Z465 357 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 PHLDB2Q86SQ0 1253 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 FAM124AQ86V42 546 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 KDM1BQ8NB78 822 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 OR52K2Q8NGK3 314 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 SLC30A5Q8TAD4 765 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 BPIFA3Q9BQP9 254 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 NUP58Q9BVL2 599 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 NUSAP1Q9BXS6 441 aaKnown RBP18.26■□□□□ 0.51
LSM5-204ENST00000409909 NAT10Q9H0A0 1025 aaKnown RBP18.26■□□□□ 0.51
LSM5-204ENST00000409909 SIK2Q9H0K1 926 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 TMPRSS4Q9NRS4 437 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 STAP1Q9ULZ2 295 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 SNX10Q9Y5X0 201 aa18.26■□□□□ 0.51
LSM5-204ENST00000409909 ADAMTS9Q9P2N4 1935 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 TEX33O43247 280 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 SIN3BO75182 1162 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 MOCS3O95396 460 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 F9P00740 461 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 CFIP05156 583 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 SRPRAP08240 638 aaKnown RBP18.25■□□□□ 0.51
LSM5-204ENST00000409909 UNGP13051 313 aaPredicted RBP18.25■□□□□ 0.51
LSM5-204ENST00000409909 ENGP17813 658 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 PLK1P53350 603 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 ST8SIA6P61647 398 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 DEUP1Q05D60 604 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 MTA1Q13330 715 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 SLC12A1Q13621 1099 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 ARID5BQ14865 1188 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 BRMS1LQ5PSV4 323 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 C9orf64Q5T6V5 341 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 ARCQ7LC44 396 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 ZNF683Q8IZ20 524 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 MSANTD4Q8NCY6 345 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 CADM4Q8NFZ8 388 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 CEP76Q8TAP6 659 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 FOXJ1Q92949 421 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 ALG14Q96F25 216 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 RPL10LQ96L21 214 aaKnown RBP18.25■□□□□ 0.51
LSM5-204ENST00000409909 CFAP57Q96MR6 1250 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 RSPH9Q9H1X1 276 aaPredicted RBP18.25■□□□□ 0.51
LSM5-204ENST00000409909 FBRSQ9HAH7 460 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 CAPN10Q9HC96 672 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 TMEM9BQ9NQ34 198 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 SLC6A14Q9UN76 642 aa18.25■□□□□ 0.51
LSM5-204ENST00000409909 ASCC3Q8N3C0 2202 aaKnown RBP18.25■□□□□ 0.51
LSM5-204ENST00000409909 CNTN5O94779 1100 aa18.24■□□□□ 0.51
LSM5-204ENST00000409909 SERPINF2P08697 491 aa18.24■□□□□ 0.51
LSM5-204ENST00000409909 ACSL1P33121 698 aa18.24■□□□□ 0.51
LSM5-204ENST00000409909 STK19P49842 368 aaPredicted RBP18.24■□□□□ 0.51
LSM5-204ENST00000409909 PTP4A2Q12974 167 aa18.24■□□□□ 0.51
LSM5-204ENST00000409909 RAB6CQ53S08 254 aa18.24■□□□□ 0.51
LSM5-204ENST00000409909 SYCP2LQ5T4T6 812 aa18.24■□□□□ 0.51
LSM5-204ENST00000409909 SND1Q7KZF4 910 aaKnown RBP eCLIP18.24■□□□□ 0.51
LSM5-204ENST00000409909 RGL4Q8IZJ4 473 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms