RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 SORCS3Q9UPU3 1222 aa20.32■□□□□ 0.84
LIMS2-207ENST00000409808 CAPN14A8MX76 684 aa20.32■□□□□ 0.84
LIMS2-207ENST00000409808 CXorf49A8MYA2 514 aaPredicted RBP20.32■□□□□ 0.84
LIMS2-207ENST00000409808 NPR3P17342 541 aa20.32■□□□□ 0.84
LIMS2-207ENST00000409808 PGM1P36871 562 aa20.32■□□□□ 0.84
LIMS2-207ENST00000409808 NDUFV1P49821 464 aa20.32■□□□□ 0.84
LIMS2-207ENST00000409808 KPNB1Q14974 876 aaKnown RBP20.32■□□□□ 0.84
LIMS2-207ENST00000409808 ACSBG2Q5FVE4 666 aa20.32■□□□□ 0.84
LIMS2-207ENST00000409808 DCLRE1AQ6PJP8 1040 aa20.32■□□□□ 0.84
LIMS2-207ENST00000409808 UNC5AQ6ZN44 842 aa20.32■□□□□ 0.84
LIMS2-207ENST00000409808 CLEC20AQ6ZU45 233 aa20.32■□□□□ 0.84
LIMS2-207ENST00000409808 KCNK16Q96T55 309 aa20.32■□□□□ 0.84
LIMS2-207ENST00000409808 FAM167BQ9BTA0 163 aa20.32■□□□□ 0.84
LIMS2-207ENST00000409808 HCSTQ9UBK5 93 aa20.32■□□□□ 0.84
LIMS2-207ENST00000409808 ZNF212Q9UDV6 495 aa20.32■□□□□ 0.84
LIMS2-207ENST00000409808 PRG3Q9Y2Y8 225 aaPredicted RBP20.32■□□□□ 0.84
LIMS2-207ENST00000409808 PITPNM1O00562 1244 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 XPO1O14980 1071 aaKnown RBP20.31■□□□□ 0.84
LIMS2-207ENST00000409808 CYP2C18P33260 490 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 OR1G1P47890 313 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 MRPS5P82675 430 aaKnown RBP20.31■□□□□ 0.84
LIMS2-207ENST00000409808 SARNPP82979 210 aaKnown RBP20.31■□□□□ 0.84
LIMS2-207ENST00000409808 KLC1Q07866 573 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 ADIGQ0VDE8 80 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 RCN1Q15293 331 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 TRIM60Q495X7 471 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 SNX30Q5VWJ9 437 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 PPFIBP2Q8ND30 876 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 ARMC2Q8NEN0 867 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 FAM172AQ8WUF8 416 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 SIGLEC10Q96LC7 697 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 NMUR2Q9GZQ4 415 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 HIPK3Q9H422 1215 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 PCDHA11Q9Y5I1 949 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 TLE2Q04725 743 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 DSC1Q08554 894 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 IRGCQ6NXR0 463 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 DEFB128Q7Z7B8 93 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 COLGALT2Q8IYK4 626 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 URGCPQ8TCY9 931 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 UROC1Q96N76 676 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 SNRNP25Q9BV90 132 aaKnown RBP20.31■□□□□ 0.84
LIMS2-207ENST00000409808 PLAC1Q9HBJ0 212 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 TMEM161AQ9NX61 479 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 CDH9Q9ULB4 789 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 LRCH1Q9Y2L9 728 aa20.31■□□□□ 0.84
LIMS2-207ENST00000409808 M0QZQ0 153 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 SNNO75324 88 aaPredicted RBP20.3■□□□□ 0.84
LIMS2-207ENST00000409808 BPGMP07738 259 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 RPL34P49207 117 aaKnown RBP20.3■□□□□ 0.84
LIMS2-207ENST00000409808 CHI3L2Q15782 390 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 DNAL1Q4LDG9 190 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 TEX44Q53QW1 395 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 KYAT3Q6YP21 454 aaKnown RBP20.3■□□□□ 0.84
LIMS2-207ENST00000409808 FAM35AQ86V20 835 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 ACMSDQ8TDX5 336 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 SMOQ99835 787 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 SEZ6LQ9BYH1 1024 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 NRDE2Q9H7Z3 1164 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 NGRNQ9NPE2 291 aaKnown RBP20.3■□□□□ 0.84
LIMS2-207ENST00000409808 TMLHEQ9NVH6 421 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 NMRK1Q9NWW6 199 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 TAGLN3Q9UI15 199 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 B2RBV5 119 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 AP1G2O75843 785 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 FAM200BP0CF97 657 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 WASHC5Q12768 1159 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 SYCP2LQ5T4T6 812 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 C6orf163Q5TEZ5 329 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 NET1Q7Z628 596 aaPredicted RBP20.3■□□□□ 0.84
LIMS2-207ENST00000409808 METTL23Q86XA0 190 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 OR10T2Q8NGX3 314 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 SEPT8Q92599 483 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 PRR11Q96HE9 360 aaPredicted RBP20.3■□□□□ 0.84
LIMS2-207ENST00000409808 HSFY1Q96LI6 401 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 PRDM16Q9HAZ2 1276 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 SMYD2Q9NRG4 433 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 PCDHB7Q9Y5E2 793 aa20.3■□□□□ 0.84
LIMS2-207ENST00000409808 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.3■□□□□ 0.84
LIMS2-207ENST00000409808 CYP11A1P05108 521 aa20.29■□□□□ 0.84
LIMS2-207ENST00000409808 PTPN9P43378 593 aa20.29■□□□□ 0.84
LIMS2-207ENST00000409808 AP1B1Q10567 949 aa20.29■□□□□ 0.84
LIMS2-207ENST00000409808 CTU1Q7Z7A3 348 aaKnown RBP20.29■□□□□ 0.84
LIMS2-207ENST00000409808 LRRTM3Q86VH5 581 aa20.29■□□□□ 0.84
LIMS2-207ENST00000409808 ARID3BQ8IVW6 561 aaPredicted RBP20.29■□□□□ 0.84
LIMS2-207ENST00000409808 NDUFAF2Q8N183 169 aa20.29■□□□□ 0.84
LIMS2-207ENST00000409808 PDCD7Q8N8D1 485 aaKnown RBP20.29■□□□□ 0.84
LIMS2-207ENST00000409808 SUSD3Q96L08 255 aa20.29■□□□□ 0.84
LIMS2-207ENST00000409808 SLC13A1Q9BZW2 595 aa20.29■□□□□ 0.84
LIMS2-207ENST00000409808 C1orf21Q9H246 121 aa20.29■□□□□ 0.84
LIMS2-207ENST00000409808 ARHGEF4Q9NR80 690 aa20.29■□□□□ 0.84
LIMS2-207ENST00000409808 THAP1Q9NVV9 213 aa20.29■□□□□ 0.84
LIMS2-207ENST00000409808 PPARGC1AQ9UBK2 798 aaKnown RBP20.29■□□□□ 0.84
LIMS2-207ENST00000409808 SPECC1L-ADORA2AF8WAN1 911 aa20.28■□□□□ 0.84
LIMS2-207ENST00000409808 CAPN9O14815 690 aa20.28■□□□□ 0.84
LIMS2-207ENST00000409808 MLNP12872 115 aa20.28■□□□□ 0.84
LIMS2-207ENST00000409808 PCSK1P29120 753 aa20.28■□□□□ 0.84
LIMS2-207ENST00000409808 ATXN1P54253 815 aaKnown RBP20.28■□□□□ 0.84
LIMS2-207ENST00000409808 STX3Q13277 289 aa20.28■□□□□ 0.84
LIMS2-207ENST00000409808 DPYSL2Q16555 572 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms