RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 DLG4P78352 724 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 E2F1Q01094 437 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 IL9RQ01113 521 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 BNC1Q01954 994 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 EHHADHQ08426 723 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 CCDC15Q0P6D6 951 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 CUL4BQ13620 913 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 CDH18Q13634 790 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 TRIP4Q15650 581 aaPredicted RBP8.05□□□□□ -1.12
LSM5-202ENST00000409292 TAF1BQ53T94 588 aaPredicted RBP8.05□□□□□ -1.12
LSM5-202ENST00000409292 SGO2Q562F6 1265 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 PPP1R26Q5T8A7 1209 aaPredicted RBP8.05□□□□□ -1.12
LSM5-202ENST00000409292 ARHGAP17Q68EM7 881 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 SHC4Q6S5L8 630 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 SND1Q7KZF4 910 aaKnown RBP eCLIP8.05□□□□□ -1.12
LSM5-202ENST00000409292 DSG4Q86SJ6 1040 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 PRPF39Q86UA1 669 aaKnown RBP8.05□□□□□ -1.12
LSM5-202ENST00000409292 MFN1Q8IWA4 741 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 FAM217AQ8IXS0 508 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 FAM186BQ8IYM0 893 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 LSMEM2Q8N112 164 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.05□□□□□ -1.12
LSM5-202ENST00000409292 ANKRD52Q8NB46 1076 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 KDM1BQ8NB78 822 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 HJURPQ8NCD3 748 aaPredicted RBP8.05□□□□□ -1.12
LSM5-202ENST00000409292 PLEKHO2Q8TD55 490 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 FGF11Q92914 225 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 TRIM62Q9BVG3 475 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 GZF1Q9H116 711 aaPredicted RBP8.05□□□□□ -1.12
LSM5-202ENST00000409292 RSPH9Q9H1X1 276 aaPredicted RBP8.05□□□□□ -1.12
LSM5-202ENST00000409292 TMEM245Q9H330 911 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 PABPC3Q9H361 631 aaKnown RBP8.05□□□□□ -1.12
LSM5-202ENST00000409292 TMEM8AQ9HCN3 771 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 PRSS16Q9NQE7 514 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 KIAA1257Q9ULG3 409 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 FZD4Q9ULV1 537 aa8.05□□□□□ -1.12
LSM5-202ENST00000409292 PLXNB3Q9ULL4 1909 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 TARSL2A2RTX5 802 aaKnown RBP8.04□□□□□ -1.12
LSM5-202ENST00000409292 XPO1O14980 1071 aaKnown RBP8.04□□□□□ -1.12
LSM5-202ENST00000409292 TBL1XO60907 577 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 SETSIPP0DME0 302 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 CD19P15391 556 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 CKMT2P17540 419 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 GLDCP23378 1020 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 HLA-FP30511 346 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 GMPRP36959 345 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 MXI1P50539 228 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 CCR5P51681 352 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 OXCT1P55809 520 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 DAB2P98082 770 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 BST2Q10589 180 aaKnown RBP8.04□□□□□ -1.12
LSM5-202ENST00000409292 OVGP1Q12889 678 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 STK4Q13043 487 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 TARDBPQ13148 414 aaKnown RBP eCLIP8.04□□□□□ -1.12
LSM5-202ENST00000409292 ADAM9Q13443 819 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 STAT4Q14765 748 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 RTP5Q14D33 572 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 CST6Q15828 149 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 GOLGA7BQ2TAP0 167 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 HES3Q5TGS1 186 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 BSPRYQ5W0U4 402 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 PM20D1Q6GTS8 502 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 GATAD2AQ86YP4 633 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 CACTIN-AS1Q8N1I8 211 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 EID2Q8N6I1 236 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 ZNF366Q8N895 744 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 FBXL13Q8NEE6 735 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 ADAM32Q8TC27 787 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 TAS1R2Q8TE23 839 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 ELMO3Q96BJ8 720 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 SERAC1Q96JX3 654 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 SLC6A18Q96N87 628 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 BBC3Q96PG8 261 aaPredicted RBP8.04□□□□□ -1.12
LSM5-202ENST00000409292 TWNKQ96RR1 684 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 LGMNQ99538 433 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 ULBP1Q9BZM6 244 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 CNGB3Q9NQW8 809 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 CISHQ9NSE2 258 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 SLC12A6Q9UHW9 1150 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 STOML2Q9UJZ1 356 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 CLCA2Q9UQC9 943 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 TRAF3IP3Q9Y228 551 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 PTPRBP23467 1997 aa8.04□□□□□ -1.12
LSM5-202ENST00000409292 TBC1D3DA0A087WVF3 549 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 TBC1D3IA0A087WXS9 549 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 TBC1D3EA0A087X179 549 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 TBC1D3KA0A087X1G2 549 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 EDDM13A0A1B0GTR0 161 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 A0A1W2PP55 124 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 TBC1D3FA6NER0 549 aaPredicted RBP8.03□□□□□ -1.12
LSM5-202ENST00000409292 TBC1D3LB9A6J9 549 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 TLR4O00206 839 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 CETN3O15182 167 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 SART1O43290 800 aaKnown RBP8.03□□□□□ -1.12
LSM5-202ENST00000409292 SRPRAP08240 638 aaKnown RBP8.03□□□□□ -1.12
LSM5-202ENST00000409292 TBC1D3HP0C7X1 549 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 ALPPL2P10696 532 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 EPB41P11171 864 aaKnown RBP8.03□□□□□ -1.12
LSM5-202ENST00000409292 GOT1P17174 413 aa8.03□□□□□ -1.12
LSM5-202ENST00000409292 C5AR1P21730 350 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms