RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 RPL34P49207 117 aaKnown RBP13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 GLUD2P49448 558 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 SARNPP82979 210 aaKnown RBP13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 SPARCL1Q14515 664 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 TMED2Q15363 201 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 SEPT7Q16181 437 aaKnown RBP13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 CCDC38Q502W7 563 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 KCNT1Q5JUK3 1230 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 LGSNQ5TDP6 509 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 TXNRD3NBQ6F5E7 133 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 SCYL2Q6P3W7 929 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 OLFML1Q6UWY5 402 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 SPATA31D4Q6ZUB0 917 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 SLC26A9Q7LBE3 791 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 STRADAQ7RTN6 431 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 ACOT1Q86TX2 421 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 NAT8LQ8N9F0 302 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 SMG7Q92540 1137 aaKnown RBP13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 HERC2P3Q9BVR0 1158 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 KLC2Q9H0B6 622 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 WDR6Q9NNW5 1121 aaKnown RBP13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 DNAJC17Q9NVM6 304 aaKnown RBP13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 DLGAP2Q9P1A6 1054 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 RCOR3Q9P2K3 495 aaPredicted RBP13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 HMGXB4Q9UGU5 601 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 RALYQ9UKM9 306 aaKnown RBP13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 PCDHB8Q9UN66 801 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 TIMM13Q9Y5L4 95 aaPredicted RBP13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 FRYLO94915 3013 aa13.3□□□□□ -0.28
SMARCB1-203ENST00000407082 IQANK1A0A1B0GTG1 560 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 HACD1B0YJ81 288 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 PRR5-ARHGAP8B1AHC4 643 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 POC1B-GALNT4F8VUJ3 575 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 ZWINTO95229 277 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 URODP06132 367 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 ZSCAN5DPP0CG00 497 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 GLULP15104 373 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 WARSP23381 471 aaKnown RBP13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 MSH2P43246 934 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 ARHGAP8P85298 464 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 DSG1Q02413 1049 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 ACTN3Q08043 901 aaPredicted RBP13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 ORC1Q13415 861 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 CCDC14Q49A88 953 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 EFHC2Q5JST6 749 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 RTP2Q5QGT7 225 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 WSCD1Q658N2 575 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 ELMSAN1Q6PJG2 1045 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 TRABD2AQ86V40 505 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 METTL23Q86XA0 190 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 SRRM1Q8IYB3 904 aaKnown RBP13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 LRRC34Q8IZ02 419 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 PJA1Q8NG27 643 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 FAM172AQ8WUF8 416 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 CPT1BQ92523 772 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 MAML1Q92585 1016 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 NXPE3Q969Y0 559 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 RTP4Q96DX8 246 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 SHDQ96IW2 340 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 CYTH2Q99418 400 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 MRPL45Q9BRJ2 306 aaKnown RBP13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 TRABDQ9H4I3 376 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 LRRC4CQ9HCJ2 640 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 EPS15L1Q9UBC2 864 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 XPO7Q9UIA9 1087 aaKnown RBP13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 DSEQ9UL01 958 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 SSX2IPQ9Y2D8 614 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 CHD8Q9HCK8 2581 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 CLUHO75153 1309 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 DENND4AQ7Z401 1863 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 C2orf16Q68DN1 1984 aa13.29□□□□□ -0.28
SMARCB1-203ENST00000407082 TRDMT1O14717 391 aaKnown RBP13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 XPO1O14980 1071 aaKnown RBP13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 RFPL2O75678 378 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 STK10O94804 968 aaKnown RBP13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 ZBED1O96006 694 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 CYP11A1P05108 521 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 ETS1P14921 441 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 TYMPP19971 482 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 ARL4AP40617 200 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 LIG3P49916 1009 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 AIF1P55008 147 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 BASP1P80723 227 aaKnown RBP13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 YWHAHQ04917 246 aaPredicted RBP13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 PDE4CQ08493 712 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 UBXN2BQ14CS0 331 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 SOWAHAQ2M3V2 549 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 ANKRD20A8PQ5CZ79 823 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 SLC9A4Q6AI14 798 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 PMF1Q6P1K2 205 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 ADGRD1Q6QNK2 874 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 PRSS55Q6UWB4 352 aaPredicted RBP13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 VSTM1Q6UX27 236 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 ANKS3Q6ZW76 656 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 PDZD4Q76G19 769 aaPredicted RBP13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 GET4Q7L5D6 327 aaPredicted RBP13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 MAML2Q8IZL2 1156 aaPredicted RBP13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 TMEM86AQ8N2M4 240 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms