RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 PRDM16Q9HAZ2 1276 aa10.68□□□□□ -0.7
FAM49A-202ENST00000406434 MBD1Q9UIS9 605 aaPredicted RBP10.68□□□□□ -0.7
FAM49A-202ENST00000406434 TMEM59LQ9UK28 342 aa10.68□□□□□ -0.7
FAM49A-202ENST00000406434 CYP8B1Q9UNU6 501 aa10.68□□□□□ -0.7
FAM49A-202ENST00000406434 HS3ST4Q9Y661 456 aa10.68□□□□□ -0.7
FAM49A-202ENST00000406434 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.68□□□□□ -0.7
FAM49A-202ENST00000406434 CFAP54Q96N23 3096 aa10.68□□□□□ -0.7
FAM49A-202ENST00000406434 GVINP1Q7Z2Y8 2422 aa10.68□□□□□ -0.7
FAM49A-202ENST00000406434 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.67□□□□□ -0.7
FAM49A-202ENST00000406434 A0A1B0GTH6 734 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 TMCO5BA8MYB1 307 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 LRP3O75074 770 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 EPN2O95208 641 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 DLDP09622 509 aaKnown RBP10.67□□□□□ -0.7
FAM49A-202ENST00000406434 PDGFRAP16234 1089 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 ID4P47928 161 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 CXCR3P49682 368 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 ST8SIA6P61647 398 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 RPL6Q02878 288 aaKnown RBP10.67□□□□□ -0.7
FAM49A-202ENST00000406434 CENPCQ03188 943 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 ZNF177Q13360 481 aaPredicted RBP10.67□□□□□ -0.7
FAM49A-202ENST00000406434 SF3A2Q15428 464 aaKnown RBP10.67□□□□□ -0.7
FAM49A-202ENST00000406434 ASIC2Q16515 512 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 CDO1Q16878 200 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 PITRM1Q5JRX3 1037 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 BRMS1LQ5PSV4 323 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 SFMBT2Q5VUG0 894 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 OTUD1Q5VV17 481 aaPredicted RBP10.67□□□□□ -0.7
FAM49A-202ENST00000406434 TRNP1Q6NT89 227 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 IRF2BP2Q7Z5L9 587 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 PACS2Q86VP3 889 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 CACUL1Q86Y37 369 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 APCDD1Q8J025 514 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 C12orf50Q8NA57 414 aaPredicted RBP10.67□□□□□ -0.7
FAM49A-202ENST00000406434 CPLX3Q8WVH0 158 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 PIGKQ92643 395 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 SIPA1Q96FS4 1042 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 LMLNQ96KR4 655 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 PRMT1Q99873 361 aaKnown RBP10.67□□□□□ -0.7
FAM49A-202ENST00000406434 SELENOOQ9BVL4 669 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 CD248Q9HCU0 757 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 TMPRSS4Q9NRS4 437 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 INTS6Q9UL03 887 aaKnown RBP10.67□□□□□ -0.7
FAM49A-202ENST00000406434 PAXBP1Q9Y5B6 917 aa10.67□□□□□ -0.7
FAM49A-202ENST00000406434 A0A1W2PQC6 194 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 LRRC53A6NM62 1247 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 ARHGAP33O14559 1287 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 SRGAP2O75044 1071 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 NDUFS2O75306 463 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 ZNF217O75362 1048 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 CAVIN2O95810 425 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 CALB1P05937 261 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 ACADMP11310 421 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 KRT3P12035 628 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 SKILP12757 684 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 MZF1P28698 734 aaPredicted RBP10.66□□□□□ -0.7
FAM49A-202ENST00000406434 SDC4P31431 198 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 RDXP35241 583 aaKnown RBP10.66□□□□□ -0.7
FAM49A-202ENST00000406434 MPLP40238 635 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 CTSOP43234 321 aaPredicted RBP10.66□□□□□ -0.7
FAM49A-202ENST00000406434 MTA1Q13330 715 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 ENPP2Q13822 863 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 CSRP2Q16527 193 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 RSPO4Q2I0M5 234 aaPredicted RBP10.66□□□□□ -0.7
FAM49A-202ENST00000406434 C15orf59Q2T9L4 293 aaPredicted RBP10.66□□□□□ -0.7
FAM49A-202ENST00000406434 AASDHQ4L235 1098 aaPredicted RBP10.66□□□□□ -0.7
FAM49A-202ENST00000406434 RNF219Q5W0B1 726 aaPredicted RBP10.66□□□□□ -0.7
FAM49A-202ENST00000406434 PMS2CLQ68D20 193 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 ACAD10Q6JQN1 1059 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 LRRC31Q6UY01 552 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 SLC36A4Q6YBV0 504 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 PRR23CQ6ZRP0 262 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 CYP2U1Q7Z449 544 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 FAM131BQ86XD5 332 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 HOMEZQ8IX15 550 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 CCAR2Q8N163 923 aaKnown RBP10.66□□□□□ -0.7
FAM49A-202ENST00000406434 JOSD2Q8TAC2 188 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 BAP1Q92560 729 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 PRCCQ92733 491 aaPredicted RBP10.66□□□□□ -0.7
FAM49A-202ENST00000406434 NT5C3BQ969T7 300 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 TTC17Q96AE7 1141 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 PGAP3Q96FM1 320 aaPredicted RBP10.66□□□□□ -0.7
FAM49A-202ENST00000406434 RPL10LQ96L21 214 aaKnown RBP10.66□□□□□ -0.7
FAM49A-202ENST00000406434 MKRN2Q9H000 416 aaKnown RBP10.66□□□□□ -0.7
FAM49A-202ENST00000406434 TMEM245Q9H330 911 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 MTG2Q9H4K7 406 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 CD93Q9NPY3 652 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 ANLNQ9NQW6 1124 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 ARHGEF38Q9NXL2 777 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 SUN2Q9UH99 717 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 ERVW-1Q9UQF0 538 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 SPTBN4Q9H254 2564 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 CEP192Q8TEP8 1941 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 NUP205Q92621 2012 aa10.66□□□□□ -0.7
FAM49A-202ENST00000406434 IGHV1OR15-9A0A0B4J2B8 117 aa10.65□□□□□ -0.7
FAM49A-202ENST00000406434 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.65□□□□□ -0.7
FAM49A-202ENST00000406434 A0A1B0GVM2 712 aa10.65□□□□□ -0.7
FAM49A-202ENST00000406434 BCLAF3A2AJT9 711 aaKnown RBP10.65□□□□□ -0.7
FAM49A-202ENST00000406434 TCAF2A6NFQ2 919 aa10.65□□□□□ -0.7
FAM49A-202ENST00000406434 SMAPO00193 183 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms