RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 PCDHB18PQ96TA0 734 aa17.35■□□□□ 0.37
CSNK1D-205ENST00000403276 TBCBQ99426 244 aa17.35■□□□□ 0.37
CSNK1D-205ENST00000403276 TSPY26PQ9H489 355 aa17.35■□□□□ 0.37
CSNK1D-205ENST00000403276 TMPRSS4Q9NRS4 437 aa17.35■□□□□ 0.37
CSNK1D-205ENST00000403276 KIAA1522Q9P206 1035 aaPredicted RBP17.35■□□□□ 0.37
CSNK1D-205ENST00000403276 PILRBQ9UKJ0 227 aa17.35■□□□□ 0.37
CSNK1D-205ENST00000403276 VANGL2Q9ULK5 521 aa17.35■□□□□ 0.37
CSNK1D-205ENST00000403276 SNX10Q9Y5X0 201 aa17.35■□□□□ 0.37
CSNK1D-205ENST00000403276 DOCK4Q8N1I0 1966 aa17.35■□□□□ 0.37
CSNK1D-205ENST00000403276 C4orf47A7E2U8 309 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 I6L893 689 aaPredicted RBP17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 CYP1A1P04798 512 aaPredicted RBP17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 ACADMP11310 421 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 MZF1P28698 734 aaPredicted RBP17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 CXCR3P49682 368 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 LIMK1P53667 647 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 DEUP1Q05D60 604 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 PLEKHG6Q3KR16 790 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 TRIM61Q5EBN2 209 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 IL31Q6EBC2 164 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 FAM124AQ86V42 546 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 ASCC3Q8N3C0 2202 aaKnown RBP17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 NT5C3BQ969T7 300 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 RPL10LQ96L21 214 aaKnown RBP17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 HSPA12BQ96MM6 686 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 RPRD1AQ96P16 312 aaPredicted RBP17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 GPR174Q9BXC1 333 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 TKTL2Q9H0I9 626 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 WDCPQ9H6R7 721 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 FSCN3Q9NQT6 498 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 WSB2Q9NYS7 404 aaPredicted RBP17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 RRN3Q9NYV6 651 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 SUN2Q9UH99 717 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 TMEM59LQ9UK28 342 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 STAP1Q9ULZ2 295 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 ERVW-1Q9UQF0 538 aa17.34■□□□□ 0.37
CSNK1D-205ENST00000403276 TM4SF5O14894 197 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 MOCS3O95396 460 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 GJB6O95452 261 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 ASLP04424 464 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 PDGFRAP16234 1089 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 MAOBP27338 520 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 SCNN1AP37088 669 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 ST8SIA6P61647 398 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 FOXK2Q01167 660 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 SLC25A52Q3SY17 297 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 RABGAP1LQ5R372 815 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 RGL4Q8IZJ4 473 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 EMC1Q8N766 993 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 MSANTD4Q8NCY6 345 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 OR52K2Q8NGK3 314 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 ZNF419Q96HQ0 510 aaPredicted RBP17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 CFAP57Q96MR6 1250 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 C11orf70Q9BRQ4 267 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 METTL5Q9NRN9 209 aaKnown RBP17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 ARHGEF38Q9NXL2 777 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 SLCO3A1Q9UIG8 710 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 DAAM1Q9Y4D1 1078 aa17.33■□□□□ 0.36
CSNK1D-205ENST00000403276 A0A1B0GVM2 712 aa17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 TCAF2A6NFQ2 919 aa17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 SMTNL1A8MU46 457 aa17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 TTC34A8MYJ7 566 aa17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 CDX4O14627 284 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 SIN3BO75182 1162 aa17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 CNTN5O94779 1100 aa17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 CFIP05156 583 aa17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 KCNA4P22459 653 aa17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 STK19P49842 368 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 RPS14P62263 151 aaKnown RBP17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 ECT2LQ008S8 904 aa17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 IQCB1Q15051 598 aa17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 RAB6CQ53S08 254 aa17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 CXorf57Q6NSI4 855 aaKnown RBP17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 SND1Q7KZF4 910 aaKnown RBP eCLIP17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 PGAP3Q96FM1 320 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 NUSAP1Q9BXS6 441 aaKnown RBP17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 RAB6CQ9H0N0 254 aa17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 CBX8Q9HC52 389 aa17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 EVLQ9UI08 416 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-205ENST00000403276 F9P00740 461 aa17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 SRPRAP08240 638 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 UNGP13051 313 aaPredicted RBP17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 MMP8P22894 467 aa17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 OXTRP30559 389 aa17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 ATP11AP98196 1134 aa17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 DUOXA1Q1HG43 343 aa17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 PPM1JQ5JR12 505 aa17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 BRMS1LQ5PSV4 323 aa17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 TTC39BQ5VTQ0 682 aaPredicted RBP17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 PEAR1Q5VY43 1037 aaPredicted RBP17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 NUP58Q9BVL2 599 aa17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 TMEM9BQ9NQ34 198 aa17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 RTN4Q9NQC3 1192 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 SEPT11Q9NVA2 429 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-205ENST00000403276 PCDH15Q96QU1 1955 aa17.3■□□□□ 0.36
CSNK1D-205ENST00000403276 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.3■□□□□ 0.36
CSNK1D-205ENST00000403276 IGLV3-19P01714 112 aa17.3■□□□□ 0.36
CSNK1D-205ENST00000403276 ENGP17813 658 aa17.3■□□□□ 0.36
CSNK1D-205ENST00000403276 MAPK8P45983 427 aa17.3■□□□□ 0.36
CSNK1D-205ENST00000403276 PTP4A2Q12974 167 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms