RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 PLK1P53350 603 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 CDH4P55283 916 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 OXCT1P55809 520 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 OGDHQ02218 1023 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 NRG1Q02297 640 aaPredicted RBP19.79■□□□□ 0.76
RTN4-207ENST00000402434 PTPRNQ16849 979 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 CXorf57Q6NSI4 855 aaKnown RBP19.79■□□□□ 0.76
RTN4-207ENST00000402434 KIAA1211LQ6NV74 962 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 LRRC31Q6UY01 552 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 ASCL5Q7RTU5 278 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 FNIP1Q8TF40 1166 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 NTAN1Q96AB6 310 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 ZNF653Q96CK0 615 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 OSBPL2Q9H1P3 480 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 TMEM245Q9H330 911 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 ABHD10Q9NUJ1 306 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 NENFQ9UMX5 172 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 TBC1D30Q9Y2I9 924 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 SNX10Q9Y5X0 201 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 E9PAM4 449 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 EIF4A3P38919 411 aaKnown RBP19.79■□□□□ 0.76
RTN4-207ENST00000402434 SCAPQ12770 1279 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 SRSF5Q13243 272 aaKnown RBP19.79■□□□□ 0.76
RTN4-207ENST00000402434 MAPK8IP2Q13387 824 aaPredicted RBP19.79■□□□□ 0.76
RTN4-207ENST00000402434 ASTE1Q2TB18 679 aaPredicted RBP19.79■□□□□ 0.76
RTN4-207ENST00000402434 PLEKHG6Q3KR16 790 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 PITRM1Q5JRX3 1037 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 ALKBH5Q6P6C2 394 aaKnown RBP19.79■□□□□ 0.76
RTN4-207ENST00000402434 CYB5D2Q8WUJ1 264 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 GAB3Q8WWW8 586 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 OR12D3Q9UGF7 316 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 SCINQ9Y6U3 715 aa19.79■□□□□ 0.76
RTN4-207ENST00000402434 EML5Q05BV3 1969 aa19.78■□□□□ 0.76
RTN4-207ENST00000402434 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.78■□□□□ 0.76
RTN4-207ENST00000402434 SSU72P8A0A1W2PR75 194 aa19.78■□□□□ 0.76
RTN4-207ENST00000402434 TCRBV21S2A2A0A5A6 115 aa19.78■□□□□ 0.76
RTN4-207ENST00000402434 ASLP04424 464 aa19.78■□□□□ 0.76
RTN4-207ENST00000402434 GABRG2P18507 467 aa19.78■□□□□ 0.76
RTN4-207ENST00000402434 CSKP41240 450 aa19.78■□□□□ 0.76
RTN4-207ENST00000402434 ADKP55263 362 aaKnown RBP19.78■□□□□ 0.76
RTN4-207ENST00000402434 ZNF177Q13360 481 aaPredicted RBP19.78■□□□□ 0.76
RTN4-207ENST00000402434 TSR1Q2NL82 804 aaKnown RBP19.78■□□□□ 0.76
RTN4-207ENST00000402434 ALFQ53S48 1182 aa19.78■□□□□ 0.76
RTN4-207ENST00000402434 MANEALQ5VSG8 457 aa19.78■□□□□ 0.76
RTN4-207ENST00000402434 SERPINA13PQ6UXR4 307 aa19.78■□□□□ 0.76
RTN4-207ENST00000402434 TMC6Q7Z403 805 aa19.78■□□□□ 0.76
RTN4-207ENST00000402434 CCDC185Q8N715 623 aa19.78■□□□□ 0.76
RTN4-207ENST00000402434 OR52K2Q8NGK3 314 aa19.78■□□□□ 0.76
RTN4-207ENST00000402434 ALG14Q96F25 216 aa19.78■□□□□ 0.76
RTN4-207ENST00000402434 MRPL47Q9HD33 250 aaKnown RBP19.78■□□□□ 0.76
RTN4-207ENST00000402434 ZNHIT6Q9NWK9 470 aaKnown RBP19.78■□□□□ 0.76
RTN4-207ENST00000402434 PPARGC1AQ9UBK2 798 aaKnown RBP19.78■□□□□ 0.76
RTN4-207ENST00000402434 ZNF212Q9UDV6 495 aa19.78■□□□□ 0.76
RTN4-207ENST00000402434 DOCK4Q8N1I0 1966 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 RPP40O75818 363 aaKnown RBP19.77■□□□□ 0.76
RTN4-207ENST00000402434 CNTN5O94779 1100 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 MOCS3O95396 460 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 DESP17661 470 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 HOXD11P31277 338 aaPredicted RBP19.77■□□□□ 0.76
RTN4-207ENST00000402434 ZNF252P-AS1Q0IIN9 211 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 SIM2Q14190 667 aaPredicted RBP19.77■□□□□ 0.76
RTN4-207ENST00000402434 SLFN11Q7Z7L1 901 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 ALYREFQ86V81 257 aaKnown RBP19.77■□□□□ 0.76
RTN4-207ENST00000402434 CNGA4Q8IV77 575 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 APCDD1Q8J025 514 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 KDM1BQ8NB78 822 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 HMGB4Q8WW32 186 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 MYO19Q96H55 970 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 MRFAP1L1Q96HT8 127 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 PPP1R9BQ96SB3 815 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 FEM1AQ9BSK4 669 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 TRIM7Q9C029 511 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 OR51B4Q9Y5P0 310 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 RAD54BQ9Y620 910 aa19.77■□□□□ 0.76
RTN4-207ENST00000402434 USP34Q70CQ2 3546 aa19.77■□□□□ 0.75
RTN4-207ENST00000402434 SDK1Q7Z5N4 2213 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 CKAP5Q14008 2032 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 SRGAP2O75044 1071 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 PRKCHP24723 683 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 MZF1P28698 734 aaPredicted RBP19.76■□□□□ 0.75
RTN4-207ENST00000402434 AIF1P55008 147 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 STARD3Q14849 445 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 SLC18A3Q16572 532 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 USP39Q53GS9 565 aaKnown RBP19.76■□□□□ 0.75
RTN4-207ENST00000402434 CCDC122Q5T0U0 273 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 SETD3Q86TU7 594 aaPredicted RBP19.76■□□□□ 0.75
RTN4-207ENST00000402434 ARFGAP1Q8N6T3 406 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 MRGPRX3Q96LB0 322 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 TPSD1Q9BZJ3 242 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 THAP2Q9H0W7 228 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 RETREG1Q9H6L5 497 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 MPP6Q9NZW5 540 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 MYO1AQ9UBC5 1043 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 SMG5Q9UPR3 1016 aaKnown RBP19.76■□□□□ 0.75
RTN4-207ENST00000402434 SPAG17Q6Q759 2223 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 WDR87Q6ZQQ6 2873 aa19.76■□□□□ 0.75
RTN4-207ENST00000402434 MUC22E2RYF6 1773 aaPredicted RBP19.76■□□□□ 0.75
RTN4-207ENST00000402434 AKR1B15C9JRZ8 316 aaPredicted RBP19.75■□□□□ 0.75
RTN4-207ENST00000402434 GFRA3O60609 400 aa19.75■□□□□ 0.75
RTN4-207ENST00000402434 CYP1A2P05177 515 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms