RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 OTOP3Q7RTS5 596 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 SPATA24Q86W54 205 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 FAM156AQ8NDB6 213 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 SPATA22Q8NHS9 363 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 TNIP3Q96KP6 325 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 COG4Q9H9E3 785 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 PLEKHA5Q9HAU0 1116 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 CHST12Q9NRB3 414 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 STX18Q9P2W9 335 aaKnown RBP12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 MCM3APO60318 1980 aa12.97□□□□□ -0.33
PPP4R1-202ENST00000400555 TM7SF2O76062 418 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 NFKB1P19838 968 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 MPSTP25325 297 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 NME5P56597 212 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 HSF5Q4G112 596 aaPredicted RBP12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 TEDDM1Q5T9Z0 273 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 SNX32Q86XE0 403 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 TDRD5Q8NAT2 981 aaKnown RBP12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 ZNF778Q96MU6 729 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 C7orf26Q96N11 449 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 SLC4A5Q9BY07 1137 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 PRM3Q9NNZ6 103 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 DCDC2Q9UHG0 476 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 ANKRD12Q6UB98 2062 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 LTFP02788 710 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 PRKCHP24723 683 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 GP5P40197 560 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 MPP3Q13368 585 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 TRMT5Q32P41 509 aaKnown RBP12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 PPM1LQ5SGD2 360 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 TMEM110Q86TL2 294 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 FCRL3Q96P31 734 aaPredicted RBP12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 FRMD8Q9BZ67 464 aaPredicted RBP12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 PLAC1Q9HBJ0 212 aa12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 UBQLN1Q9UMX0 589 aaKnown RBP12.96□□□□□ -0.33
PPP4R1-202ENST00000400555 FAM159BA6NKW6 160 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 ADCY6O43306 1168 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 CNMDO75829 334 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 KLHL2O95198 593 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 VAPBO95292 243 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 PGM3O95394 542 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 SERPINA6P08185 405 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 FDFT1P37268 417 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 IDH3AP50213 366 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 ABCE1P61221 599 aaKnown RBP12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 ZNF534Q76KX8 674 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 B3GALNT2Q8NCR0 500 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 ACVR1CQ8NER5 493 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 EBF3Q9H4W6 596 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 PIGVQ9NUD9 493 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 DDX43Q9NXZ2 648 aaKnown RBP12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 SIRPGQ9P1W8 387 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 FETUBQ9UGM5 382 aa12.96□□□□□ -0.34
PPP4R1-202ENST00000400555 MEIS3P2A8K0S8 358 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 GCATO75600 419 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 C2P06681 752 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 ACADSP16219 412 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 PGAM1P18669 254 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 MATKP42679 507 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 MRPS22P82650 360 aaKnown RBP12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 KRT72Q14CN4 511 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 DGKDQ16760 1214 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 SLC9B1Q4ZJI4 515 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 FSTL4Q6MZW2 842 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 IYDQ6PHW0 289 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 RPS27LQ71UM5 84 aaKnown RBP12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 PDZD4Q76G19 769 aaPredicted RBP12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 GPC2Q8N158 579 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 GDPD5Q8WTR4 605 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 CDRT15Q96T59 188 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 DNAI2Q9GZS0 605 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 CNTN3Q9P232 1028 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 COPG2Q9UBF2 871 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 SSX2IPQ9Y2D8 614 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 YJEFN3A6XGL0 299 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 E7ENQ6 273 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 NRP1O14786 923 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 PEX2P28328 305 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 SOX4Q06945 474 aaPredicted RBP12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 TAZQ16635 292 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 SH3D19Q5HYK7 790 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 SCN4BQ8IWT1 228 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 PAF1Q8N7H5 531 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 KCTD4Q8WVF5 259 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 QKIQ96PU8 341 aaKnown RBP eCLIP12.95□□□□□ -0.348e-10■■■■□ 19.6
PPP4R1-202ENST00000400555 OR52B2Q96RD2 323 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 TSR3Q9UJK0 312 aaKnown RBP12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 PDHXO00330 501 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 CCL22O00626 93 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 TRAFD1O14545 582 aaPredicted RBP12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 MDM4O15151 490 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 PIGNO95427 931 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 MT-CYBP00156 380 aaPredicted RBP12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 FAM200BP0CF97 657 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 CD1EP15812 388 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 SMPD1P17405 629 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 MED21Q13503 144 aa12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 KYAT3Q6YP21 454 aaKnown RBP12.95□□□□□ -0.34
PPP4R1-202ENST00000400555 FRMD7Q6ZUT3 714 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms