RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 ABRAQ8N0Z2 381 aa9.05□□□□□ -0.96
PTPRM-202ENST00000400053 PCDH20Q8N6Y1 951 aaKnown RBP9.05□□□□□ -0.96
PTPRM-202ENST00000400053 ZNF513Q8N8E2 541 aaPredicted RBP9.05□□□□□ -0.96
PTPRM-202ENST00000400053 RAD18Q9NS91 495 aa9.05□□□□□ -0.96
PTPRM-202ENST00000400053 CISHQ9NSE2 258 aa9.05□□□□□ -0.96
PTPRM-202ENST00000400053 FAM208AQ9UK61 1670 aaKnown RBP9.04□□□□□ -0.96
PTPRM-202ENST00000400053 MRASO14807 208 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 DPEP1P16444 411 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 TNFRSF8P28908 595 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 ATP12AP54707 1039 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 MYL6P60660 151 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 DDR1Q08345 913 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 CDH18Q13634 790 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 PDK2Q15119 407 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 PDK3Q15120 406 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 TDRD10Q5VZ19 366 aaKnown RBP9.04□□□□□ -0.96
PTPRM-202ENST00000400053 RNF43Q68DV7 783 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 POLNQ7Z5Q5 900 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 ZFPM1Q8IX07 1006 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 DHRSXQ8N5I4 330 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
PTPRM-202ENST00000400053 KAT5Q92993 513 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 GPAMQ9HCL2 828 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 RRN3Q9NYV6 651 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 NRXN3Q9Y4C0 1643 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 A8MUI8 341 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 MEIS2O14770 477 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 NPTXRO95502 500 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 GSTM1P09488 218 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 SUPT20HL2P0C7V6 817 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 ETS1P14921 441 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 TPH1P17752 444 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 IL12RB1P42701 662 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 MARCKSL1P49006 195 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 HNMTP50135 292 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 BACE1P56817 501 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 VAC14Q08AM6 782 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 PRKAA1Q13131 559 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 SLC15A2Q16348 729 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 NFIL3Q16649 462 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 TIMM50Q3ZCQ8 353 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 ATAD3BQ5T9A4 648 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 C1orf186Q6ZWK4 172 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 PRELID2Q8N945 189 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 POMGNT2Q8NAT1 580 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 COLGALT1Q8NBJ5 622 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 L3MBTL3Q96JM7 780 aaPredicted RBP9.04□□□□□ -0.96
PTPRM-202ENST00000400053 COLEC11Q9BWP8 271 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 DGCR6LQ9BY27 220 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 MMADHCQ9H3L0 296 aaPredicted RBP9.04□□□□□ -0.96
PTPRM-202ENST00000400053 PRDM5Q9NQX1 630 aaPredicted RBP9.04□□□□□ -0.96
PTPRM-202ENST00000400053 ATAD3AQ9NVI7 634 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 H7C4K7 107 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 HOXA2O43364 376 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 LDLRP01130 860 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 TKTP29401 623 aaKnown RBP9.04□□□□□ -0.96
PTPRM-202ENST00000400053 MMP14P50281 582 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 PSMD4P55036 377 aaKnown RBP9.04□□□□□ -0.96
PTPRM-202ENST00000400053 SOX10P56693 466 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 PMF1Q6P1K2 205 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 ZFP1Q6P2D0 407 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 LRRC49Q8IUZ0 686 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 SLC44A2Q8IWA5 706 aaPredicted RBP9.04□□□□□ -0.96
PTPRM-202ENST00000400053 FAM81AQ8TBF8 368 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 ZNF606Q8WXB4 792 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 NSMCE2Q96MF7 247 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 RNF145Q96MT1 663 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 APOL4Q9BPW4 351 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 ZNF518BQ9C0D4 1074 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 PXMP2Q9NR77 195 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 SAE1Q9UBE0 346 aaPredicted RBP9.04□□□□□ -0.96
PTPRM-202ENST00000400053 SLC25A13Q9UJS0 675 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 RNF112Q9ULX5 631 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 A0A096LPK6 155 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 UPP2O95045 317 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 KRT6AP02538 564 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 IL6P05231 212 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 ERVK-10P10266 1014 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 ALADP13716 330 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 ALOX12P18054 663 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 PAICSP22234 425 aaKnown RBP9.04□□□□□ -0.96
PTPRM-202ENST00000400053 RAP1GAPP47736 663 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 CASP5P51878 434 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 PRKAA2P54646 552 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 MGAT5BQ3V5L5 792 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 CBWD6Q4V339 395 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 CBWD3Q5JTY5 395 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 CBWD5Q5RIA9 395 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 SH3BP5LQ7L8J4 393 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 SAMD7Q7Z3H4 446 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 TTC7BQ86TV6 843 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 ZCCHC9Q8N567 271 aaKnown RBP9.04□□□□□ -0.96
PTPRM-202ENST00000400053 FLCNQ8NFG4 579 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 STARD8Q92502 1023 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 INPP4AQ96PE3 977 aaPredicted RBP9.04□□□□□ -0.96
PTPRM-202ENST00000400053 S100A13Q99584 98 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 CLPBQ9H078 707 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 KCNK4Q9NYG8 393 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 AP4E1Q9UPM8 1137 aa9.04□□□□□ -0.96
PTPRM-202ENST00000400053 LTN1O94822 1766 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms