RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 CDH2P19022 906 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-204ENST00000397545 GSTT1P30711 240 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 DSG3P32926 999 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 PPP3CCP48454 512 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 CD151P48509 253 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 GSSP48637 474 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 USP4Q13107 963 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 ATP1A4Q13733 1029 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 VEPH1Q14D04 833 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 BBS12Q6ZW61 710 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 ANKRD27Q96NW4 1050 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 PORCNQ9H237 461 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 LRMDAQ9H2I8 198 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 XPNPEP3Q9NQH7 507 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 WWOXQ9NZC7 414 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 DRG1Q9Y295 367 aaKnown RBP10.98□□□□□ -0.65
CCDC40-204ENST00000397545 GON4LQ3T8J9 2241 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 ATP6AP2A0A1C7CYW4 349 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 ATP6AP2O75787 350 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 YBX3P16989 372 aaKnown RBP eCLIP10.98□□□□□ -0.65
CCDC40-204ENST00000397545 S100A5P33763 92 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 SLC6A3Q01959 620 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 ATP6AP1LQ52LC2 224 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 ZNF484Q5JVG2 852 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 EEF1DP3Q658K8 133 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 LRRC8BQ6P9F7 803 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 CMC1Q7Z7K0 106 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 SLC44A2Q8IWA5 706 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-204ENST00000397545 OPTNQ96CV9 577 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 ZBED2Q9BTP6 218 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 DDX43Q9NXZ2 648 aaKnown RBP10.98□□□□□ -0.65
CCDC40-204ENST00000397545 CROTQ9UKG9 612 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 CRYL1Q9Y2S2 319 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 AP4S1Q9Y587 144 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 C1orf232A0A0U1RR37 186 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 STRNO43815 780 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 KRT8P05787 483 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 ITGB6P18564 788 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 EPHA3P29320 983 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 CDH17Q12864 832 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 TRAF2Q12933 501 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 TTC7BQ86TV6 843 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 ANKRD13AQ8IZ07 590 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 LZICQ8WZA0 190 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 RNF157Q96PX1 679 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 SCN3BQ9NY72 215 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 ATP11BQ9Y2G3 1177 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 COL11A2P13942 1736 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-204ENST00000397545 RRN3P2A6NIE6 340 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 PTGES3LE9PB15 166 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 RGS5O15539 181 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 ASMTLO95671 621 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 KRT72Q14CN4 511 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 NR6A1Q15406 480 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 GJC2Q5T442 439 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-204ENST00000397545 NIPA1Q7RTP0 329 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 ADCK2Q7Z695 626 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 CLNKQ7Z7G1 428 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 HORMAD1Q86X24 394 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 TMCO5AQ8N6Q1 288 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 REPS2Q8NFH8 660 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 GMLQ99445 158 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 PRDM12Q9H4Q4 367 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 ADARB2Q9NS39 739 aaKnown RBP10.98□□□□□ -0.65
CCDC40-204ENST00000397545 IL1RAPL1Q9NZN1 696 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 SFMBT1Q9UHJ3 866 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 SLCO1B7G3V0H7 640 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 B4GALT5O43286 388 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 KATNA1O75449 491 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 WDR47O94967 919 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 RBP1P09455 135 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 PGAM1P18669 254 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 GTF2A2P52657 109 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 STK32CQ86UX6 486 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 FAM83AQ86UY5 434 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 KIAA0319LQ8IZA0 1049 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 BHLHE22Q8NFJ8 381 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-204ENST00000397545 RMND5BQ96G75 393 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-204ENST00000397545 SIKE1Q9BRV8 207 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 MRGBPQ9NV56 204 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 NMRK1Q9NWW6 199 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 CRLS1Q9UJA2 301 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 POMCP01189 267 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 UBA1P22314 1058 aaKnown RBP10.97□□□□□ -0.65
CCDC40-204ENST00000397545 SERPINB1P30740 379 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 SCNN1BP51168 640 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 TJAP1Q5JTD0 557 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 KYAT3Q6YP21 454 aaKnown RBP10.97□□□□□ -0.65
CCDC40-204ENST00000397545 CCDC126Q96EE4 140 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 BBS2Q9BXC9 721 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 SPASTQ9UBP0 616 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 UMODL1Q5DID0 1318 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 PLA2G6O60733 806 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 ZNF189O75820 626 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-204ENST00000397545 ZNF682O95780 498 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 ANPEPP15144 967 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 ATP6V1C1P21283 382 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 FASP25445 335 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 FAM183BPQ6ZVS7 135 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 DHFR2Q86XF0 187 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms