RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 PAXBP1Q9Y5B6 917 aa10.93□□□□□ -0.66
NUP98-205ENST00000397007 A0A1B0GVM2 712 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 ANTXRLA6NF34 631 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 TCAF2A6NFQ2 919 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 PRRT4C9JH25 899 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 MOCS3O95396 460 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 PFKPQ01813 784 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 SLC12A1Q13621 1099 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 SPA17Q15506 151 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 RFWD3Q6PCD5 774 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 RFX8Q6ZV50 586 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 ZNF572Q7Z3I7 529 aaPredicted RBP10.92□□□□□ -0.66
NUP98-205ENST00000397007 CPA6Q8N4T0 437 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 TEX26Q8N6G2 289 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 IER2Q9BTL4 223 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 PRMT8Q9NR22 394 aaPredicted RBP10.92□□□□□ -0.66
NUP98-205ENST00000397007 THG1LQ9NWX6 298 aaKnown RBP10.92□□□□□ -0.66
NUP98-205ENST00000397007 MYO1FO00160 1098 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 FGF10O15520 208 aaPredicted RBP10.92□□□□□ -0.66
NUP98-205ENST00000397007 PALMO75781 387 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 SLC11A2P49281 568 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 COPS2P61201 443 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 RPS24P62847 133 aaKnown RBP10.92□□□□□ -0.66
NUP98-205ENST00000397007 SLC10A2Q12908 348 aaPredicted RBP10.92□□□□□ -0.66
NUP98-205ENST00000397007 NME3Q13232 169 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 SKIV2LQ15477 1246 aaKnown RBP10.92□□□□□ -0.66
NUP98-205ENST00000397007 RAP1GAP2Q684P5 730 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 ARHGEF2Q92974 986 aaKnown RBP10.92□□□□□ -0.66
NUP98-205ENST00000397007 ETNK2Q9NVF9 386 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 CTTNBP2NLQ9P2B4 639 aa10.92□□□□□ -0.66
NUP98-205ENST00000397007 hCG_1818297A0A087WSY0 165 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 CAPN9O14815 690 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 TULP3O75386 442 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 SYNPOQ8N3V7 929 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 ST13P5Q8NFI4 369 aaPredicted RBP10.91□□□□□ -0.66
NUP98-205ENST00000397007 MAML1Q92585 1016 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 LSM7Q9UK45 103 aaKnown RBP10.91□□□□□ -0.66
NUP98-205ENST00000397007 MFHAS1Q9Y4C4 1052 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 ILVBLA1L0T0 632 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 BHMG1C9JSJ3 638 aaPredicted RBP10.91□□□□□ -0.66
NUP98-205ENST00000397007 CLDN11O75508 207 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 ADH1CP00326 375 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 CD70P32970 193 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 ZNF33AQ06730 810 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 DMC1Q14565 340 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 PAPD7Q5XG87 772 aaKnown RBP10.91□□□□□ -0.66
NUP98-205ENST00000397007 DCUN1D2Q6PH85 259 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 TRIM67Q6ZTA4 783 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 PJA1Q8NG27 643 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 NSMCE3Q96MG7 304 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 ZYG11BQ9C0D3 744 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 HEBP1Q9NRV9 189 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 HS3ST2Q9Y278 367 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 SH3BP1Q9Y3L3 701 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 MTF2Q9Y483 593 aaPredicted RBP10.91□□□□□ -0.66
NUP98-205ENST00000397007 A0A0C4DFX4 3053 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 PCDH15Q96QU1 1955 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 APOEP02649 317 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 PRLRP16471 622 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 GOT1P17174 413 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 NDST2P52849 883 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 VCPP55072 806 aaKnown RBP10.91□□□□□ -0.66
NUP98-205ENST00000397007 RNASE9P60153 205 aaKnown RBP10.91□□□□□ -0.66
NUP98-205ENST00000397007 ARF5P84085 180 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 GALNT2Q10471 571 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 LMAN2Q12907 356 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 ANKRD20A8PQ5CZ79 823 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 RHOT1Q8IXI2 618 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 PLPP6Q8IY26 295 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 LTB4R2Q9NPC1 389 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 DDX56Q9NY93 547 aaKnown RBP10.91□□□□□ -0.66
NUP98-205ENST00000397007 RAD54BQ9Y620 910 aa10.91□□□□□ -0.66
NUP98-205ENST00000397007 TRIM24O15164 1050 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 ADAM23O75077 832 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 TARSP26639 723 aaKnown RBP10.9□□□□□ -0.66
NUP98-205ENST00000397007 HOXA6P31267 233 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 SOX9P48436 509 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 GALK1P51570 392 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 GEN1Q17RS7 908 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 RSRC2Q7L4I2 434 aaKnown RBP10.9□□□□□ -0.66
NUP98-205ENST00000397007 TSGA13Q96PP4 275 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 RNF157Q96PX1 679 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 GORASP1Q9BQQ3 440 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 CCDC66A2RUB6 948 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 GPR37L1O60883 481 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 KRT7P08729 469 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 IRF1P10914 325 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 CBLBQ13191 982 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 PRKD1Q15139 912 aaPredicted RBP10.9□□□□□ -0.66
NUP98-205ENST00000397007 TERB1Q8NA31 727 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 TBC1D31Q96DN5 1066 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 DDX50Q9BQ39 737 aaKnown RBP10.9□□□□□ -0.66
NUP98-205ENST00000397007 FEM1AQ9BSK4 669 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 ARHGEF3Q9NR81 526 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 NEU2Q9Y3R4 380 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 DCXO43602 365 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 KIF5AQ12840 1032 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 IHHQ14623 411 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 CDO1Q16878 200 aa10.9□□□□□ -0.66
NUP98-205ENST00000397007 GPATCH2LQ9NWQ4 482 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms