RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 TBC1D3DA0A087WVF3 549 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 TBC1D3IA0A087WXS9 549 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 TBC1D3EA0A087X179 549 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 TBC1D3KA0A087X1G2 549 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 GOLGA6L7A0A1B0GV03 622 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 TBC1D3FA6NER0 549 aaPredicted RBP8.75□□□□□ -1.01
SCFD1-202ENST00000396629 TTC34A8MYJ7 566 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 TBC1D3LB9A6J9 549 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 SDC3O75056 442 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 CSO75390 466 aaKnown RBP8.75□□□□□ -1.01
SCFD1-202ENST00000396629 PRR29P0C7W0 189 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 TBC1D3HP0C7X1 549 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 GIMD1P0DJR0 217 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 CASP1P29466 404 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 SLC6A4P31645 630 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 DRD3P35462 400 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 PSMD8P48556 350 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 NASPP49321 788 aaPredicted RBP8.75□□□□□ -1.01
SCFD1-202ENST00000396629 FAM133BQ5BKY9 247 aaKnown RBP8.75□□□□□ -1.01
SCFD1-202ENST00000396629 TBC1D3GQ6DHY5 549 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 TBC1D3CQ6IPX1 549 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 MSANTD2Q6P1R3 559 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 MFN1Q8IWA4 741 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 TBC1D3Q8IZP1 549 aaPredicted RBP8.75□□□□□ -1.01
SCFD1-202ENST00000396629 STK40Q8N2I9 435 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 SLC4A11Q8NBS3 891 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 RNF139Q8WU17 664 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 FAXDC2Q96IV6 333 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 IMPG2Q9BZV3 1241 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 KCTD10Q9H3F6 313 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 TJP2Q9UDY2 1190 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 A0A1B0GVM2 712 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 HAX1O00165 279 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 MAPK13O15264 365 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 ACSL4O60488 711 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 GP1BAP07359 652 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 PDCP20941 246 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 DGKAP23743 735 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 MZF1P28698 734 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-202ENST00000396629 CTSOP43234 321 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-202ENST00000396629 RAD23BP54727 409 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 ZNF394Q53GI3 561 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 PITRM1Q5JRX3 1037 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 KIAA1614Q5VZ46 1190 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 BSPRYQ5W0U4 402 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 TRIM69Q86WT6 500 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 SCML4Q8N228 414 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 TTC39CQ8N584 583 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 LINC00301Q8NCQ3 95 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 TAS1R2Q8TE23 839 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 EDEM1Q92611 657 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 PTPRN2Q92932 1015 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 BLZF1Q9H2G9 400 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 ABCC13Q9NSE7 274 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 STIM2Q9P246 746 aa8.74□□□□□ -1.01
SCFD1-202ENST00000396629 UBR5O95071 2799 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-202ENST00000396629 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-202ENST00000396629 LY6G6EA0A0G2JKS1 128 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 A0A1W2PNU3 283 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-202ENST00000396629 TULP2O00295 520 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 PDXKO00764 312 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 TERTO14746 1132 aaKnown RBP8.73□□□□□ -1.01
SCFD1-202ENST00000396629 XPO1O14980 1071 aaKnown RBP8.73□□□□□ -1.01
SCFD1-202ENST00000396629 SLC7A4O43246 635 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 MSI1O43347 362 aaKnown RBP8.73□□□□□ -1.01
SCFD1-202ENST00000396629 PLRG1O43660 514 aaKnown RBP8.73□□□□□ -1.01
SCFD1-202ENST00000396629 NR3C1P04150 777 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 KRT10P13645 584 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 SLC11A2P49281 568 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 VAMP7P51809 220 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 SLC8A3P57103 927 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 CUL4AQ13619 759 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 STAT4Q14765 748 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 C8orf34Q49A92 452 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 HS1BP3Q53T59 392 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 COLEC12Q5KU26 742 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 NADSYN1Q6IA69 706 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-202ENST00000396629 PRICKLE2Q7Z3G6 844 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 TMC6Q7Z403 805 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 UNC45BQ8IWX7 931 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 EXD3Q8N9H8 876 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 HJURPQ8NCD3 748 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-202ENST00000396629 CCDC97Q96F63 343 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-202ENST00000396629 KLHDC7BQ96G42 594 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 PRR11Q96HE9 360 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-202ENST00000396629 PRICKLE1Q96MT3 831 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-202ENST00000396629 SLC46A1Q96NT5 459 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.73□□□□□ -1.01
SCFD1-202ENST00000396629 USP29Q9HBJ7 922 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 KLHL11Q9NVR0 708 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 UCKL1Q9NWZ5 548 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 SLCO3A1Q9UIG8 710 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 U3KQA8 63 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 PTPN13Q12923 2485 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 YJEFN3A6XGL0 299 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 E7ENQ6 273 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 PRAMEF26H0Y7S4 382 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 KLRC4O43908 158 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 RNGTTO60942 597 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms