RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 C16orf59Q7L2K0 433 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 CYP2U1Q7Z449 544 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 EGFL6Q8IUX8 553 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 DQX1Q8TE96 717 aaKnown RBP7.16□□□□□ -1.26
RTN4-205ENST00000394609 GIPC2Q8TF65 315 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 RSAD2Q8WXG1 361 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 CCT6BQ92526 530 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 ZNF689Q96CS4 500 aaPredicted RBP7.16□□□□□ -1.26
RTN4-205ENST00000394609 C8orf48Q96LL4 319 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 YME1L1Q96TA2 773 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 WHRNQ9P202 907 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 ANAPC5Q9UJX4 755 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 FBXW11Q9UKB1 542 aa7.16□□□□□ -1.26
RTN4-205ENST00000394609 TPX2Q9ULW0 747 aaKnown RBP7.16□□□□□ -1.26
RTN4-205ENST00000394609 MRPL42Q9Y6G3 142 aaKnown RBP7.16□□□□□ -1.26
RTN4-205ENST00000394609 WDR27A2RRH5 827 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 H0YGN5 161 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 LUC7L3O95232 432 aaKnown RBP7.15□□□□□ -1.26
RTN4-205ENST00000394609 TBX18O95935 607 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 F9P00740 461 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 ALADP13716 330 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 GBP1P32455 592 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 CHKAP35790 457 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 MAGEA11P43364 429 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 SCTRP47872 440 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 CCNG1P51959 295 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 CLNS1AP54105 237 aaKnown RBP7.15□□□□□ -1.26
RTN4-205ENST00000394609 ROR1Q01973 937 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 NOMO1Q15155 1222 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 PSMD5Q16401 504 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 CCDC38Q502W7 563 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 UBAP2Q5T6F2 1119 aaKnown RBP7.15□□□□□ -1.26
RTN4-205ENST00000394609 DENND5BQ6ZUT9 1274 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 GBP7Q8N8V2 638 aaPredicted RBP7.15□□□□□ -1.26
RTN4-205ENST00000394609 ANKS4BQ8N8V4 417 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 OR2W6PQ8NHA6 318 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 CFAP61Q8NHU2 1237 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 RNF139Q8WU17 664 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 AUTS2Q8WXX7 1259 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 CASP10Q92851 521 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 BADQ92934 168 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 FAF2Q96CS3 445 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 PGAP3Q96FM1 320 aaPredicted RBP7.15□□□□□ -1.26
RTN4-205ENST00000394609 TMEM169Q96HH4 297 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 SEC16BQ96JE7 1060 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 ZNF558Q96NG5 402 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 SH3GL3Q99963 347 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 CLSTN3Q9BQT9 956 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 FRMD8P1Q9BZ68 369 aaPredicted RBP7.15□□□□□ -1.26
RTN4-205ENST00000394609 TKTL2Q9H0I9 626 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 ADAM7Q9H2U9 754 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 SEMA4AQ9H3S1 761 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 CCDC134Q9H6E4 229 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 ARHGEF4Q9NR80 690 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 ABCC13Q9NSE7 274 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 GMIPQ9P107 970 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 MTRF1LQ9UGC7 380 aaKnown RBP7.15□□□□□ -1.26
RTN4-205ENST00000394609 MAGED2Q9UNF1 606 aaPredicted RBP7.15□□□□□ -1.26
RTN4-205ENST00000394609 SCML2Q9UQR0 700 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 PLAAQ9Y263 795 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 NR2E3Q9Y5X4 410 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 NFS1Q9Y697 457 aa7.15□□□□□ -1.26
RTN4-205ENST00000394609 H3BRJ5 948 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 GOLGA8MH3BSY2 632 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 EEF2KO00418 725 aaKnown RBP7.15□□□□□ -1.27
RTN4-205ENST00000394609 KCNN4O15554 427 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 PPFIA2O75334 1257 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 EFEMP2O95967 443 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 SRGAP2BP0DMP2 458 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 HAPLN1P10915 354 aaPredicted RBP7.15□□□□□ -1.27
RTN4-205ENST00000394609 TGM2P21980 687 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 YWHAQP27348 245 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 RBL1P28749 1068 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 RPL22P35268 128 aaKnown RBP7.15□□□□□ -1.27
RTN4-205ENST00000394609 CXCR3P49682 368 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 PMS2P54278 862 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 PPP2R2AP63151 447 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 TAF10Q12962 218 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 ARL13BQ3SXY8 428 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 CMPK2Q5EBM0 449 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 SYCP2LQ5T4T6 812 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 NCBP2-AS2Q69YL0 99 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 RHBDF2Q6PJF5 856 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 RIPOR1Q6ZS17 1223 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 RFX8Q6ZV50 586 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 MON1AQ86VX9 555 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 PSTKQ8IV42 348 aaKnown RBP7.15□□□□□ -1.27
RTN4-205ENST00000394609 TP53INP2Q8IXH6 220 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 SLC39A11Q8N1S5 342 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 SCML4Q8N228 414 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 BEND7Q8N7W2 519 aaPredicted RBP7.15□□□□□ -1.27
RTN4-205ENST00000394609 UHMK1Q8TAS1 419 aaKnown RBP7.15□□□□□ -1.27
RTN4-205ENST00000394609 SPPL2BQ8TCT7 592 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 SLC9A7Q96T83 725 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 PLCD4Q9BRC7 762 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 TXLNGYQ9BZA5 131 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 MCOLN1Q9GZU1 580 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 SIK2Q9H0K1 926 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 FBXO44Q9H4M3 255 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 USP29Q9HBJ7 922 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms