RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 PSMD10O75832 226 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 PARNO95453 639 aaKnown RBP22.27■■□□□ 1.16
CLDND1-202ENST00000394180 CFBP00751 764 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 GABRB3P28472 473 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 GJC1P36383 396 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 PSMD8P48556 350 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 THOP1P52888 689 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 LSM12Q3MHD2 195 aaKnown RBP22.27■■□□□ 1.16
CLDND1-202ENST00000394180 EPGNQ6UW88 154 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 DAW1Q8N136 415 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 BHLHE22Q8NFJ8 381 aaPredicted RBP22.27■■□□□ 1.16
CLDND1-202ENST00000394180 YTHDF1Q9BYJ9 559 aaKnown RBP22.27■■□□□ 1.16
CLDND1-202ENST00000394180 SLC13A1Q9BZW2 595 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 IVNS1ABPQ9Y6Y0 642 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 TCRBV7S3A2A0A539 114 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 ACOT8O14734 319 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 MGEA5O60502 916 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 RSL1D1O76021 490 aaKnown RBP22.27■■□□□ 1.16
CLDND1-202ENST00000394180 OTUD4Q01804 1114 aaKnown RBP22.27■■□□□ 1.16
CLDND1-202ENST00000394180 ATP1A4Q13733 1029 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 AGAP7PQ5VUJ5 663 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 SCARA3Q6AZY7 606 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 ISLR2Q6UXK2 745 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 TTC30AQ86WT1 665 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 DSELQ8IZU8 1212 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 ACTL9Q8TC94 416 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 MAGEE1Q9HCI5 957 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 RIPK3Q9Y572 518 aa22.27■■□□□ 1.16
CLDND1-202ENST00000394180 COL11A1P12107 1806 aaPredicted RBP22.27■■□□□ 1.16
CLDND1-202ENST00000394180 LOC100653049A0A140TA62 436 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 A0A1B0GTW7 788 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 NFIBO00712 420 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 KRT34O76011 436 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 ADRB2P07550 413 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 XRCC1P18887 633 aaPredicted RBP22.26■■□□□ 1.15
CLDND1-202ENST00000394180 NCF2P19878 526 aaPredicted RBP22.26■■□□□ 1.15
CLDND1-202ENST00000394180 GLDCP23378 1020 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 PSMC5P62195 406 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 CTBSQ01459 385 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 CTAGE3PQ8IX95 158 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 ADGRF2Q8IZF7 708 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 REPS2Q8NFH8 660 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 TAMM41Q96BW9 452 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 MFSD14AQ96MC6 490 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 SORT1Q99523 831 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 C11orf70Q9BRQ4 267 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 DCUN1D5Q9BTE7 237 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 NPLQ9BXD5 320 aaPredicted RBP22.26■■□□□ 1.15
CLDND1-202ENST00000394180 MRPL46Q9H2W6 279 aaKnown RBP22.26■■□□□ 1.15
CLDND1-202ENST00000394180 ARMC7Q9H6L4 198 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 ADAMTS5Q9UNA0 930 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 ARHGEF35A5YM69 484 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 KDM1AO60341 852 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 STAMBPO95630 424 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 EPHA3P29320 983 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 TMBIM6P55061 237 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 HUNKP57058 714 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 TMEM132BQ14DG7 1078 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 ATP13A4Q4VNC1 1196 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 ZFYVE27Q5T4F4 411 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 PHTF2Q8N3S3 785 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 CPSF7Q8N684 471 aaKnown RBP22.26■■□□□ 1.15
CLDND1-202ENST00000394180 MFSD2AQ8NA29 543 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 COQ10BQ9H8M1 238 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 C8orf4Q9NR00 106 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 DCDC2Q9UHG0 476 aa22.26■■□□□ 1.15
CLDND1-202ENST00000394180 LOC285556D6RIA3 1793 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 IGLV3-22A0A075B6J6 115 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 C3orf70A6NLC5 250 aaPredicted RBP22.25■■□□□ 1.15
CLDND1-202ENST00000394180 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.25■■□□□ 1.15
CLDND1-202ENST00000394180 DCXO43602 365 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 NOL3O60936 208 aaKnown RBP22.25■■□□□ 1.15
CLDND1-202ENST00000394180 TADA2AO75478 443 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 RNASEH2AO75792 299 aaKnown RBP22.25■■□□□ 1.15
CLDND1-202ENST00000394180 C7P10643 843 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 GDF10P55107 478 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 SPCS2Q15005 226 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 KCNJ8Q15842 424 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 SNRNP35Q16560 246 aaKnown RBP22.25■■□□□ 1.15
CLDND1-202ENST00000394180 ATP6V0D2Q8N8Y2 350 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 PNPT1Q8TCS8 783 aaKnown RBP22.25■■□□□ 1.15
CLDND1-202ENST00000394180 ATP2A3Q93084 1043 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 CDRT15Q96T59 188 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 WDR11Q9BZH6 1224 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 VRTNQ9H8Y1 702 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 MOV10Q9HCE1 1003 aaKnown RBP22.25■■□□□ 1.15
CLDND1-202ENST00000394180 C1orf112Q9NSG2 853 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 HOXC10Q9NYD6 342 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 ZNF214Q9UL59 606 aaPredicted RBP22.25■■□□□ 1.15
CLDND1-202ENST00000394180 MRPL11Q9Y3B7 192 aaKnown RBP22.25■■□□□ 1.15
CLDND1-202ENST00000394180 FAM159BA6NKW6 160 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 APOEP02649 317 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 NAT1P18440 290 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 MYF6P23409 242 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 MAGEA6P43360 314 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 ABCE1P61221 599 aaKnown RBP22.25■■□□□ 1.15
CLDND1-202ENST00000394180 PPP4R4Q6NUP7 873 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 TFAP2CQ92754 450 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 FBXL18Q96ME1 805 aa22.25■■□□□ 1.15
CLDND1-202ENST00000394180 AGTPBP1Q9UPW5 1226 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms