RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 LSAMPQ13449 338 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 CDO1Q16878 200 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 SESTD1Q86VW0 696 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 SPATA16Q9BXB7 569 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 PSMC3IPQ9P2W1 217 aaPredicted RBP7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 ZNF148Q9UQR1 794 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 ST14Q9Y5Y6 855 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 C7orf72A4D263 438 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 TM7SF2O76062 418 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 SLC25A27O95847 323 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 LTFP02788 710 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 PAPOLAP51003 745 aaKnown RBP7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 EIF3EP60228 445 aaKnown RBP7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 PURAQ00577 322 aaKnown RBP7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 EML3Q32P44 896 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 KCNT2Q6UVM3 1135 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 CES3Q6UWW8 571 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 DENND5BQ6ZUT9 1274 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 TMEM135Q86UB9 458 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 SLC45A3Q96JT2 553 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 KLHL32Q96NJ5 620 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 OSBPL2Q9H1P3 480 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 SLC52A3Q9NQ40 469 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 ZFP69BQ9UJL9 534 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 ITGA11Q9UKX5 1188 aa7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 HBS1LQ9Y450 684 aaKnown RBP7.94□□□□□ -1.14
GAPVD1-207ENST00000394105 CHADO15335 359 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 KCNA5P22460 613 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 LRPAP1P30533 357 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 EPHX2P34913 555 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 ZFP36L2P47974 494 aaKnown RBP7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 CETN1Q12798 172 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 CENPLQ8N0S6 344 aaPredicted RBP7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 CCDC97Q96F63 343 aaPredicted RBP7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 RBM41Q96IZ5 413 aaKnown RBP7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 SHCBP1LQ9BZQ2 653 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 MROH8Q9H579 483 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 IPPQ9Y573 584 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 PDGFRAP16234 1089 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 FMNL3Q8IVF7 1028 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 DNAJB3Q8WWF6 145 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 TRIM11Q96F44 468 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 TINF2Q9BSI4 451 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 PNPOQ9NVS9 261 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 RNF181Q9P0P0 153 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 MAGEB3O15480 346 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 AOC1P19801 751 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 CYP2F1P24903 491 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 SLC5A2P31639 672 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 CAV1Q03135 178 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 BIRC2Q13490 618 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 STILQ15468 1287 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 WDR44Q5JSH3 913 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 SMYD5Q6GMV2 418 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 C17orf99Q6UX52 265 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 CYS1Q717R9 158 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 PIGZQ86VD9 579 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 HPS6Q86YV9 775 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 TTC9BQ8N6N2 239 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 TMIGD2Q96BF3 282 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 ZNF670Q9BS34 389 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 PRMT7Q9NVM4 692 aaPredicted RBP7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 STX16-NPEPL1H3BU86 382 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 DNAJA2O60884 412 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 PTPN1P18031 435 aaKnown RBP7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 ITGAXP20702 1163 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 GPD1P21695 349 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 ABCG1P45844 678 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 CLCNKBP51801 687 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 CALCOCO2Q13137 446 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 TMEM132DQ14C87 1099 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 USP41Q3LFD5 358 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 ZNF398Q8TD17 642 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 PRICKLE1Q96MT3 831 aaPredicted RBP7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 ZNF408Q9H9D4 720 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 RIMS3Q9UJD0 308 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 RASAL2Q9UJF2 1139 aa7.93□□□□□ -1.14
GAPVD1-207ENST00000394105 SGK1O00141 431 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 NVLO15381 856 aaKnown RBP7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 PDGFRBP09619 1106 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 ATICP31939 592 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 AP3M2P53677 418 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 RCN2Q14257 317 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 PAFAH1B3Q15102 231 aaKnown RBP7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 TIFABQ6ZNK6 161 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 SCD5Q86SK9 330 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 RIBC1Q8N443 379 aaPredicted RBP7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 LPPQ93052 612 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 GRAMD1AQ96CP6 724 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 APOPT1Q96IL0 206 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 CYP3A43Q9HB55 503 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 TMEM216Q9P0N5 145 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 IKZF3Q9UKT9 509 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 SF3B1O75533 1304 aaKnown RBP eCLIP7.92□□□□□ -1.144e-6■■■■■ 63.2
GAPVD1-207ENST00000394105 H0Y858 1186 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 CASQ2O14958 399 aaPredicted RBP7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 AP1G1O43747 822 aa7.92□□□□□ -1.14
GAPVD1-207ENST00000394105 PDE5AO76074 875 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms