RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 GALNT2Q10471 571 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 FASTKD3Q14CZ7 662 aaKnown RBP8.87□□□□□ -0.99
TDP1-203ENST00000393454 SNX30Q5VWJ9 437 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 PID1Q7Z2X4 250 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 TFAP2DQ7Z6R9 452 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 CCDC13Q8IYE1 715 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 ATPAF2Q8N5M1 289 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 LZTR1Q8N653 840 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 RTL3Q8N8U3 475 aaKnown RBP8.87□□□□□ -0.99
TDP1-203ENST00000393454 PSMG2Q969U7 264 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 EXOC4Q96A65 974 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 TRMT2BQ96GJ1 504 aaKnown RBP8.87□□□□□ -0.99
TDP1-203ENST00000393454 RPRD1AQ96P16 312 aaPredicted RBP8.87□□□□□ -0.99
TDP1-203ENST00000393454 C17orf80Q9BSJ5 609 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 ZYG11BQ9C0D3 744 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 VPS37BQ9H9H4 285 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 NEU3Q9UQ49 428 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 LINC01553A4QN01 128 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 C2orf78A6NCI8 922 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 ALOX15BO15296 676 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 MTSS1O43312 755 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 IGLV3-27P01718 113 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 MYOGP15173 224 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 PTPN3P26045 913 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 SLCO1A2P46721 670 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 PPP3CCP48454 512 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 WASHC5Q12768 1159 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 MSS51Q4VC12 460 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 FBXL22Q6P050 247 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 CCDC149Q6ZUS6 474 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 ZNF354CQ86Y25 554 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 RELL1Q8IUW5 271 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 PALM2Q8IXS6 379 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 ZNF567Q8N184 647 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 ELMOD1Q8N336 334 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 ZNF276Q8N554 614 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 SH2D3CQ8N5H7 860 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 KREMEN2Q8NCW0 462 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 USP33Q8TEY7 942 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 PYROXD1Q8WU10 500 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 POF1BQ8WVV4 589 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 HDAC11Q96DB2 347 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 ATP6V1G3Q96LB4 118 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 TTC25Q96NG3 672 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 CCDC77Q9BR77 488 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 SLC39A8Q9C0K1 460 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 LRRC4CQ9HCJ2 640 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 GKN1Q9NS71 199 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 NDFIP2Q9NV92 336 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 RWDD3Q9Y3V2 267 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 HIDE1A8MVS5 230 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 GRXCR1A8MXD5 290 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 F5H5T6 163 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 RASGRF2O14827 1237 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 EIF3HO15372 352 aaKnown RBP eCLIP8.86□□□□□ -0.99
TDP1-203ENST00000393454 AVILO75366 819 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 CNTN5O94779 1100 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 GLUD1P00367 558 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 JCHAINP01591 159 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 C8AP07357 584 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 MBL2P11226 248 aaPredicted RBP8.86□□□□□ -0.99
TDP1-203ENST00000393454 RHOQP17081 205 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 TACR2P21452 398 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 PSMB4P28070 264 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 SLC11A2P49281 568 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 IRAK1P51617 712 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 SARNPP82979 210 aaKnown RBP8.86□□□□□ -0.99
TDP1-203ENST00000393454 MTA1Q13330 715 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 PARP6Q2NL67 630 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 PABPC1LQ4VXU2 614 aaKnown RBP8.86□□□□□ -0.99
TDP1-203ENST00000393454 NADSYN1Q6IA69 706 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 KLHDC10Q6PID8 442 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 ARHGAP36Q6ZRI8 547 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 DENND1CQ8IV53 801 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 LGI2Q8N0V4 545 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 FBXO36Q8NEA4 188 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 TTC16Q8NEE8 873 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 FAM76AQ8TAV0 307 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 SPPL3Q8TCT6 385 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 EPS8L3Q8TE67 593 aaKnown RBP8.86□□□□□ -0.99
TDP1-203ENST00000393454 IGSF8Q969P0 613 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 AGAP3Q96P47 875 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 RNF38Q9H0F5 515 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 ZNF334Q9HCZ1 680 aaPredicted RBP8.86□□□□□ -0.99
TDP1-203ENST00000393454 TLR9Q9NR96 1032 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 SMPD4Q9NXE4 827 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 DONSONQ9NYP3 566 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 PPARGC1AQ9UBK2 798 aaKnown RBP8.86□□□□□ -0.99
TDP1-203ENST00000393454 LZTS1Q9Y250 596 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 ASB3Q9Y575 518 aa8.86□□□□□ -0.99
TDP1-203ENST00000393454 A0A087WUV0 522 aaPredicted RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 C2orf71A6NGG8 1288 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 HMGB1P1B2RPK0 211 aaPredicted RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 RGS16O15492 202 aaPredicted RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 ZBTB24O43167 697 aaPredicted RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 ACSL4O60488 711 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 NEBLO76041 1014 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 CCNCP24863 283 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 DNAJB1P25685 340 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 GABRR2P28476 465 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms