RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 PODNQ7Z5L7 613 aa16.75■□□□□ 0.27
PHTF1-205ENST00000393357 FAM131BQ86XD5 332 aa16.75■□□□□ 0.27
PHTF1-205ENST00000393357 SNX29P2Q8IUI4 249 aa16.75■□□□□ 0.27
PHTF1-205ENST00000393357 DCPSQ96C86 337 aaKnown RBP16.75■□□□□ 0.27
PHTF1-205ENST00000393357 SERPINI1Q99574 410 aa16.75■□□□□ 0.27
PHTF1-205ENST00000393357 MRPS26Q9BYN8 205 aaKnown RBP16.75■□□□□ 0.27
PHTF1-205ENST00000393357 ST6GALNAC4Q9H4F1 302 aa16.75■□□□□ 0.27
PHTF1-205ENST00000393357 PMM2O15305 246 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 CHADO15335 359 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 GLRA3O75311 464 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 COL6A2P12110 1019 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 GPD1P21695 349 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 CYP2F1P24903 491 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 NME3Q13232 169 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 PTK2BQ14289 1009 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 PATL1Q86TB9 770 aaKnown RBP16.74■□□□□ 0.27
PHTF1-205ENST00000393357 KCTD17Q8N5Z5 321 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 SDCBP2Q9H190 292 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 TSPYL2Q9H2G4 693 aaPredicted RBP16.74■□□□□ 0.27
PHTF1-205ENST00000393357 SNX15Q9NRS6 342 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 CEPT1Q9Y6K0 416 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 ENTPD3O75355 529 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 C1QAP02745 245 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 NR1H2P55055 460 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 PRPSAP1Q14558 356 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 SNRNP48Q6IEG0 339 aaKnown RBP16.74■□□□□ 0.27
PHTF1-205ENST00000393357 RBM12BQ8IXT5 1001 aaKnown RBP16.74■□□□□ 0.27
PHTF1-205ENST00000393357 FAM149B1Q96BN6 582 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 NAA50Q9GZZ1 169 aaKnown RBP16.74■□□□□ 0.27
PHTF1-205ENST00000393357 ZDHHC7Q9NXF8 308 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 FEM1BQ9UK73 627 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 A0A096LPK6 155 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 A0A1W2PPW3 197 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 TCRBV5S1A1TA0A578 114 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 EEF1B2P24534 225 aaKnown RBP16.74■□□□□ 0.27
PHTF1-205ENST00000393357 SP2Q02086 613 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 BNIP3Q12983 259 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 PDAP1Q13442 181 aaKnown RBP16.74■□□□□ 0.27
PHTF1-205ENST00000393357 TBCCQ15814 346 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 MCF2L2Q86YR7 1114 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 TRNAU1APQ9NX07 287 aaKnown RBP16.74■□□□□ 0.27
PHTF1-205ENST00000393357 DNAJB4Q9UDY4 337 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 EGFL7Q9UHF1 273 aa16.74■□□□□ 0.27
PHTF1-205ENST00000393357 TNNC2P02585 160 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 MMP10P09238 476 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 LCP1P13796 627 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 HSD17B4P51659 736 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 POU5F1BQ06416 359 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 DGKDQ16760 1214 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 POTEHQ6S545 545 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 NUP93Q8N1F7 819 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 COLGALT1Q8NBJ5 622 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 OR52K1Q8NGK4 314 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 NDUFA13Q9P0J0 144 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 FETUBQ9UGM5 382 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 SH3GLB1Q9Y371 365 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 NEMP2A6NFY4 417 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 AGRPO00253 132 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 EIF4BP23588 611 aaKnown RBP16.73■□□□□ 0.27
PHTF1-205ENST00000393357 VARSP26640 1264 aaKnown RBP16.73■□□□□ 0.27
PHTF1-205ENST00000393357 PSMB4P28070 264 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 PLCL1Q15111 1095 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 EEF1DP3Q658K8 133 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 PID1Q7Z2X4 250 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 MARVELD2Q8N4S9 558 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 MFSD3Q96ES6 412 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 GATA5Q9BWX5 397 aaPredicted RBP16.73■□□□□ 0.27
PHTF1-205ENST00000393357 RMI1Q9H9A7 625 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 RNF11Q9Y3C5 154 aa16.73■□□□□ 0.27
PHTF1-205ENST00000393357 RNF103-CHMP3A0A140T963 221 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 SPAG6O75602 509 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 ME2P23368 584 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 SFNP31947 248 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 RABGGTBP53611 331 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 RAVER1Q8IY67 606 aaKnown RBP16.72■□□□□ 0.27
PHTF1-205ENST00000393357 MCUQ8NE86 351 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 CMASQ8NFW8 434 aaPredicted RBP16.72■□□□□ 0.27
PHTF1-205ENST00000393357 EXT2Q93063 718 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 ELOVL4Q9GZR5 314 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 STK39Q9UEW8 545 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 PCDHGA4Q9Y5G9 962 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 TLL2Q9Y6L7 1015 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 KCNH1O95259 989 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 OATP04181 439 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 NFICP08651 508 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 CCDC166P0CW27 439 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 PRKCHP24723 683 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 GNA12Q03113 381 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 CAPSQ13938 189 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 ARL13AQ5H913 290 aaPredicted RBP16.72■□□□□ 0.27
PHTF1-205ENST00000393357 GLRA4Q5JXX5 417 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 ZNF280DQ6N043 979 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 ZBTB49Q6ZSB9 765 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 FAM160B2Q86V87 743 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 IFNLR1Q8IU57 520 aaPredicted RBP16.72■□□□□ 0.27
PHTF1-205ENST00000393357 OR9I1Q8NGQ6 314 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 RMND5BQ96G75 393 aaPredicted RBP16.72■□□□□ 0.27
PHTF1-205ENST00000393357 BTBD9Q96Q07 612 aa16.72■□□□□ 0.27
PHTF1-205ENST00000393357 ACO2Q99798 780 aaKnown RBP16.72■□□□□ 0.27
PHTF1-205ENST00000393357 FERMT1Q9BQL6 677 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms