RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 RAP1GDS1P52306 607 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 CNGA3Q16281 694 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 SOWAHAQ2M3V2 549 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 PAN2Q504Q3 1202 aaKnown RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 LIN52Q52LA3 116 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 IYDQ6PHW0 289 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 CAND1Q86VP6 1230 aaKnown RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 SLC2A14Q8TDB8 520 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 GATA6Q92908 595 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 LPPQ93052 612 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 CMTM5Q96DZ9 223 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 LRGUKQ96M69 825 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 NR1H4Q96RI1 486 aaPredicted RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 GORASP1Q9BQQ3 440 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 ARHGEF4Q9NR80 690 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 APPL1Q9UKG1 709 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 UBQLN1Q9UMX0 589 aaKnown RBP11.12□□□□□ -0.63
BRF1-204ENST00000392557 ASB3Q9Y575 518 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 SLC4A7Q9Y6M7 1214 aa11.12□□□□□ -0.63
BRF1-204ENST00000392557 CAPN8A6NHC0 703 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 KPNA7A9QM74 516 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 SPTLC1O15269 473 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 CREB3O43889 395 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 SIN3BO75182 1162 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 USP12O75317 370 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 ERVK-10P10266 1014 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 NUDT2P50583 147 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 SOX4Q06945 474 aaPredicted RBP11.11□□□□□ -0.63
BRF1-204ENST00000392557 GSTA3Q16772 222 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 MORN1Q5T089 497 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 TRNP1Q6NT89 227 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 LCLAT1Q6UWP7 414 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 CMC1Q7Z7K0 106 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 RASAL3Q86YV0 1011 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 CDKL3Q8IVW4 592 aaPredicted RBP11.11□□□□□ -0.63
BRF1-204ENST00000392557 ARHGAP18Q8N392 663 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 APPL2Q8NEU8 664 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 SREK1Q8WXA9 508 aaKnown RBP11.11□□□□□ -0.63
BRF1-204ENST00000392557 SCYL1Q96KG9 808 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 CNBD2Q96M20 576 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 EBNA1BP2Q99848 306 aaKnown RBP11.11□□□□□ -0.63
BRF1-204ENST00000392557 MED10Q9BTT4 135 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 SNRNP25Q9BV90 132 aaKnown RBP11.11□□□□□ -0.63
BRF1-204ENST00000392557 NME7Q9Y5B8 376 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 M0QZ92 97 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 HUS1O60921 280 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 RTN3O95197 1032 aaPredicted RBP11.11□□□□□ -0.63
BRF1-204ENST00000392557 RALBP11234 206 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 ENO3P13929 434 aaPredicted RBP11.11□□□□□ -0.63
BRF1-204ENST00000392557 TFE3P19532 575 aaPredicted RBP11.11□□□□□ -0.63
BRF1-204ENST00000392557 MGAT1P26572 445 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 DEUP1Q05D60 604 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 DLG1Q12959 904 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 BOLA3Q53S33 107 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 SFT2D3Q587I9 215 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 MARK2Q7KZI7 788 aaKnown RBP11.11□□□□□ -0.63
BRF1-204ENST00000392557 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.11□□□□□ -0.63
BRF1-204ENST00000392557 PCDH19Q8TAB3 1148 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 USP13Q92995 863 aaPredicted RBP11.11□□□□□ -0.63
BRF1-204ENST00000392557 MCRS1Q96EZ8 462 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 OLFM3Q96PB7 478 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 FERMT1Q9BQL6 677 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 ARHGAP39Q9C0H5 1083 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 IPPQ9Y573 584 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 CLDN5O00501 218 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 TRDMT1O14717 391 aaKnown RBP11.11□□□□□ -0.63
BRF1-204ENST00000392557 SERPINB9P50453 376 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 INCA1Q0VD86 236 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 CRHR2Q13324 411 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 CES4AQ5XG92 561 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 SATL1Q86VE3 508 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 ARRDC4Q8NCT1 418 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 MOCOSQ96EN8 888 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 HIC2Q96JB3 615 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 LGMNQ99538 433 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 NDNQ99608 321 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 FAM192AQ9GZU8 254 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 DDX18Q9NVP1 670 aaKnown RBP11.11□□□□□ -0.63
BRF1-204ENST00000392557 AK5Q9Y6K8 562 aa11.11□□□□□ -0.63
BRF1-204ENST00000392557 SCN4AP35499 1836 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 PFKMP08237 780 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 CCNFP41002 786 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 RPS6KA3P51812 740 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 COG7P83436 770 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 FNIP1Q8TF40 1166 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 TSNARE1Q96NA8 513 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 ZIC5Q96T25 663 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 UNKQ9C0B0 810 aaKnown RBP11.1□□□□□ -0.63
BRF1-204ENST00000392557 PCDH18Q9HCL0 1135 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 XPNPEP3Q9NQH7 507 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 CNTN3Q9P232 1028 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 PLA2G4CQ9UP65 541 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 DTNAQ9Y4J8 743 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 RPS6KL1Q9Y6S9 549 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 CAPN14A8MX76 684 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 GOLGA8TH3BQL2 631 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 PAPSS1O43252 624 aaPredicted RBP11.1□□□□□ -0.63
BRF1-204ENST00000392557 ATP9BO43861 1147 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 OR6B1O95007 311 aa11.1□□□□□ -0.63
BRF1-204ENST00000392557 TSHRP16473 764 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms