RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 EPHX1P07099 455 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 HLA-EP13747 358 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 PRKCIP41743 596 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 PTPN9P43378 593 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 ID4P47928 161 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 SULT1E1P49888 294 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 ARID5AQ03989 594 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 DEUP1Q05D60 604 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 C1QBPQ07021 282 aaKnown RBP11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 CDH18Q13634 790 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 RSPO4Q2I0M5 234 aaPredicted RBP11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 SKOR2Q2VWA4 1001 aaPredicted RBP11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 PLEKHG6Q3KR16 790 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 CCDC14Q49A88 953 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 FILIP1LQ4L180 1135 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 RAB6CQ53S08 254 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 FIGNQ5HY92 759 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 RABGAP1LQ5R372 815 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 PPP1R15BQ5SWA1 713 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 ACBD5Q5T8D3 534 aaPredicted RBP11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 E4F1Q66K89 784 aaPredicted RBP11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 SLC36A4Q6YBV0 504 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 LPCAT2Q7L5N7 544 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 CIR1Q86X95 450 aaPredicted RBP11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 APCDD1Q8J025 514 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 EMC1Q8N766 993 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 OR52K2Q8NGK3 314 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 OR2T3Q8NH03 318 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 JOSD2Q8TAC2 188 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 RXFP2Q8WXD0 754 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 RNF34Q969K3 372 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 ZNF419Q96HQ0 510 aaPredicted RBP11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 CFAP57Q96MR6 1250 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 HAPLN3Q96S86 360 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 C11orf70Q9BRQ4 267 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 RAB6CQ9H0N0 254 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 FBRSQ9HAH7 460 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 PRDM16Q9HAZ2 1276 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 PRSS16Q9NQE7 514 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 METTL5Q9NRN9 209 aaKnown RBP11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 VPS45Q9NRW7 570 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 WSB2Q9NYS7 404 aaPredicted RBP11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 ADAM22Q9P0K1 906 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 ZNF212Q9UDV6 495 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 VANGL2Q9ULK5 521 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 ITIH6Q6UXX5 1313 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 TPRP12270 2363 aaKnown RBP11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 SIGLEC16A6NMB1 481 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 H0Y626 953 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 ZBTB24O43167 697 aaPredicted RBP11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 SYNCRIPO60506 623 aaKnown RBP11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 CLDN11O75508 207 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 SRPRAP08240 638 aaKnown RBP11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 CCDC172P0C7W6 258 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 MZF1P28698 734 aaPredicted RBP11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 RDXP35241 583 aaKnown RBP11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 RFC1P35251 1148 aaPredicted RBP11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 PTGER3P43115 390 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 CTSOP43234 321 aaPredicted RBP11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 NSFP46459 744 aaKnown RBP11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 LIMK1P53667 647 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 FANCCQ00597 558 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 PUM1Q14671 1186 aaKnown RBP eCLIP11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 SF3A2Q15428 464 aaKnown RBP11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 CCDC6Q16204 474 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 HNRNPA1L2Q32P51 320 aaKnown RBP11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 FNDC3BQ53EP0 1204 aaKnown RBP11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 ACAD10Q6JQN1 1059 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 STRADAQ7RTN6 431 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 TMEFF1Q8IYR6 380 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 ZNF366Q8N895 744 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 C3orf20Q8ND61 904 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 ERLEC1Q96DZ1 483 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 SIPA1Q96FS4 1042 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 RPRD1AQ96P16 312 aaPredicted RBP11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 FEM1AQ9BSK4 669 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 TMPRSS4Q9NRS4 437 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 RXFP3Q9NSD7 469 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 SUN2Q9UH99 717 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 SLCO3A1Q9UIG8 710 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 PILRBQ9UKJ0 227 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 CYP8B1Q9UNU6 501 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 ERVW-1Q9UQF0 538 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 PAXBP1Q9Y5B6 917 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 SNX10Q9Y5X0 201 aa11.74□□□□□ -0.53
IGHV4-28-201ENST00000390612 LRRC53A6NM62 1247 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 TM4SF5O14894 197 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 MAP3K13O43283 966 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 AP5Z1O43299 807 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 GDF9O60383 454 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 CNTN5O94779 1100 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 GJB6O95452 261 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 CALB1P05937 261 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 KRT3P12035 628 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 PDGFRAP16234 1089 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 SDHBP21912 280 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 ADRA1BP35368 520 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 GGCXP38435 758 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 DHPSP49366 369 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms