RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 LRRC8CQ8TDW0 803 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ABHD5Q8WTS1 349 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 FAM216AQ8WUB2 273 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ZFPM2Q8WW38 1151 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 IPCEF1Q8WWN9 437 aaPredicted RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ASB12Q8WXK4 309 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 IP6K1Q92551 441 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 CD101Q93033 1021 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 TRIM43Q96BQ3 446 aaPredicted RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 NMD3Q96D46 503 aaKnown RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ZDHHC12Q96GR4 267 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 CLMNQ96JQ2 1002 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 ADGRG7Q96K78 797 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 APOLD1Q96LR9 279 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 FAM227BQ96M60 508 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 DUX3Q96PT4 197 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 UHRF2Q96PU4 802 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 NUP88Q99567 741 aaPredicted RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 B3GNT5Q9BYG0 378 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 LDHAL6BQ9BYZ2 381 aaPredicted RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 GFRA4Q9GZZ7 299 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 IL25Q9H293 177 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 SLC25A32Q9H2D1 315 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 TMX1Q9H3N1 280 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 CATSPERBQ9H7T0 1116 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 AS3MTQ9HBK9 375 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 AASDHPPTQ9NRN7 309 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 TMOD4Q9NZQ9 345 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 GABBR1Q9UBS5 961 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 AFF4Q9UHB7 1163 aaKnown RBP0.64□□□□□ -2.31
SNORD28-201ENST00000384706 FBXO4Q9UKT5 387 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 TPCN1Q9ULQ1 816 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 GAB2Q9UQC2 676 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 TNFSF13BQ9Y275 285 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 COL15A1P39059 1388 aa0.64□□□□□ -2.31
SNORD28-201ENST00000384706 LMTK3Q96Q04 1460 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 CAPN8A6NHC0 703 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 ISM1B1AKI9 464 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 PRAC2D3DTV9 90 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 KIF3BO15066 747 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 ITM2AO43736 263 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 EXTL3O43909 919 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 CCNT2O60583 730 aaKnown RBP0.63□□□□□ -2.31
SNORD28-201ENST00000384706 CTNND1O60716 968 aaKnown RBP0.63□□□□□ -2.31
SNORD28-201ENST00000384706 CBFA2T3O75081 653 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 PPP6R2O75170 966 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 SERPINI2O75830 405 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 NEURL1O76050 574 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 CNTN5O94779 1100 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 KAT7O95251 611 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 IL18RAPO95256 599 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 CRYAAP02489 173 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 AFPP02771 609 aaKnown RBP0.63□□□□□ -2.31
SNORD28-201ENST00000384706 LCKP06239 509 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF883P0CG24 379 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 ARP10275 920 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 DAOP14920 347 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 NAGAP17050 411 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 HSPA6P17066 643 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 KLRC2P26717 231 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 CHRNA5P30532 468 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 TNFSF8P32971 234 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 SLC16A2P36021 539 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 AMTP48728 403 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 NUDT6P53370 316 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 SLC37A1P57057 533 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 PHEXP78562 749 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 SHC2P98077 582 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 AMPD3Q01432 767 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 BNC1Q01954 994 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 GPS1Q13098 491 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 MYBPHQ13203 477 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 SNTA1Q13424 505 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 HDAC1Q13547 482 aaPredicted RBP0.63□□□□□ -2.31
SNORD28-201ENST00000384706 CBFBQ13951 182 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 HNF4GQ14541 408 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 RBBP5Q15291 538 aaKnown RBP0.63□□□□□ -2.31
SNORD28-201ENST00000384706 CNN3Q15417 329 aaKnown RBP0.63□□□□□ -2.31
SNORD28-201ENST00000384706 FCN2Q15485 313 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 CCDC6Q16204 474 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 DUSP6Q16828 381 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 PLEKHO1Q53GL0 409 aaPredicted RBP0.63□□□□□ -2.31
SNORD28-201ENST00000384706 C10orf76Q5T2E6 689 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 RNF187Q5TA31 235 aaPredicted RBP0.63□□□□□ -2.31
SNORD28-201ENST00000384706 FAM90A2PQ658T7 463 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 ABLIM2Q6H8Q1 611 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 CCDC144NLQ6NUI1 221 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 AAGABQ6PD74 315 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 RNF44Q7L0R7 432 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 SLC26A9Q7LBE3 791 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 KRT27Q7Z3Y8 459 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 PALB2Q86YC2 1186 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 EPHX4Q8IUS5 362 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 TPH2Q8IWU9 490 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 SDR16C5Q8N3Y7 309 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 PAQR4Q8N4S7 273 aaPredicted RBP0.63□□□□□ -2.31
SNORD28-201ENST00000384706 SLC25A41Q8N5S1 370 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 HORMAD2Q8N7B1 307 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 ANKRD44Q8N8A2 993 aa0.63□□□□□ -2.31
SNORD28-201ENST00000384706 LRRC57Q8N9N7 239 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms