RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 LRSAM1Q6UWE0 723 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 FAM124AQ86V42 546 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 CACUL1Q86Y37 369 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 ZDHHC17Q8IUH5 632 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 NAXDQ8IW45 347 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 LGI2Q8N0V4 545 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 KDF1Q8NAX2 398 aaPredicted RBP13.43□□□□□ -0.26
RPAIN-202ENST00000381208 C1orf216Q8TAB5 229 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 WFDC5Q8TCV5 224 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 SKA1Q96BD8 255 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 PPP1R13BQ96KQ4 1090 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 RRN3Q9NYV6 651 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 MSRB2Q9Y3D2 182 aa13.43□□□□□ -0.26
RPAIN-202ENST00000381208 ITIH6Q6UXX5 1313 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 A0A1B0GVM2 712 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 SPAARA0A1B0GVQ0 90 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 TCAF2A6NFQ2 919 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 BECN2A8MW95 431 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 SH3BP5O60239 455 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 DFNA5O60443 496 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 SLC9A1P19634 815 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 TACR2P21452 398 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 CD27P26842 260 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 PON1P27169 355 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 ERCC5P28715 1186 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-202ENST00000381208 ACSL1P33121 698 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 ECT2LQ008S8 904 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 CT47A1Q5JQC4 288 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-202ENST00000381208 PITRM1Q5JRX3 1037 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 ACBD5Q5T8D3 534 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-202ENST00000381208 C11orf57Q6ZUT1 292 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-202ENST00000381208 GLRX5Q86SX6 157 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 ZNF366Q8N895 744 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 C1orf131Q8NDD1 294 aaKnown RBP13.42□□□□□ -0.26
RPAIN-202ENST00000381208 ADAM32Q8TC27 787 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 GANCQ8TET4 914 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 SNX19Q92543 992 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 RNF34Q969K3 372 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 MYO19Q96H55 970 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 SLC2A13Q96QE2 648 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 CDC6Q99741 560 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 PABPC3Q9H361 631 aaKnown RBP13.42□□□□□ -0.26
RPAIN-202ENST00000381208 C6orf106Q9H6K1 298 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-202ENST00000381208 GAREM1Q9H706 876 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 FAM204AQ9H8W3 233 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 FBXL12Q9NXK8 326 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 CYTH4Q9UIA0 394 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 INTS6Q9UL03 887 aaKnown RBP13.42□□□□□ -0.26
RPAIN-202ENST00000381208 FZD4Q9ULV1 537 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 ERVW-1Q9UQF0 538 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 APOBEC2Q9Y235 224 aaKnown RBP13.42□□□□□ -0.26
RPAIN-202ENST00000381208 PAXBP1Q9Y5B6 917 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 CABIN1Q9Y6J0 2220 aa13.42□□□□□ -0.26
RPAIN-202ENST00000381208 FAM221BA6H8Z2 402 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 LRRC72A6NJI9 287 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 FLRT2O43155 660 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 SIN3BO75182 1162 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 KRT37O76014 449 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 ADH1BP00325 375 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 PLK1P53350 603 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 CST6Q15828 149 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 RAP1GAP2Q684P5 730 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 ZNF397Q8NF99 534 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-202ENST00000381208 OR2I1PQ8NGU4 316 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 MRGPRX3Q96LB0 322 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 SYNCQ9H7C4 482 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 TM7SF3Q9NS93 570 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 DDIT4Q9NX09 232 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 PLA2G2EQ9NZK7 142 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 ADAMTS1Q9UHI8 967 aa13.41□□□□□ -0.26
RPAIN-202ENST00000381208 HYAL3O43820 417 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-202ENST00000381208 FSBPO95073 299 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 NOS2P35228 1153 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 RACK1P63244 317 aaKnown RBP13.4□□□□□ -0.26
RPAIN-202ENST00000381208 ELAVL3Q14576 367 aaKnown RBP13.4□□□□□ -0.26
RPAIN-202ENST00000381208 HLA-BQ31612 363 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 FSCBQ5H9T9 825 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 C9orf64Q5T6V5 341 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 KIAA0895LQ68EN5 471 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 GJB7Q6PEY0 223 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 DBX2Q6ZNG2 339 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 SLC26A9Q7LBE3 791 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 RAB44Q7Z6P3 723 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-202ENST00000381208 ADAT2Q7Z6V5 191 aaKnown RBP13.4□□□□□ -0.26
RPAIN-202ENST00000381208 DSG4Q86SJ6 1040 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 IRF2BP1Q8IU81 584 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 DEFB106AQ8N104 65 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 CFAP52Q8N1V2 620 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 SETD7Q8WTS6 366 aaKnown RBP13.4□□□□□ -0.26
RPAIN-202ENST00000381208 ADAMTS14Q8WXS8 1223 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 GATA6Q92908 595 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 IGSF8Q969P0 613 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 BIRC7Q96CA5 298 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 CPXM1Q96SM3 734 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 PRMT1Q99873 361 aaKnown RBP13.4□□□□□ -0.26
RPAIN-202ENST00000381208 OMDQ99983 421 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 NDST4Q9H3R1 872 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 TM9SF3Q9HD45 589 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 DNAJC12Q9UKB3 198 aa13.4□□□□□ -0.26
RPAIN-202ENST00000381208 STAP1Q9ULZ2 295 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms