RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 KLHDC7BQ96G42 594 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 TMEM176AQ96HP8 235 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 FMO2Q99518 471 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 NLNQ9BYT8 704 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 TMEM8AQ9HCN3 771 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 FAM114A2Q9NRY5 505 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 KIAA1522Q9P206 1035 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-202ENST00000379446 COL20A1Q9P218 1284 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 MCM8Q9UJA3 840 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 KIAA1257Q9ULG3 409 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 INSL5Q9Y5Q6 135 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 NUP188Q5SRE5 1749 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 MYH7P12883 1935 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 A6NNZ2 444 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 HMGB1P1B2RPK0 211 aaPredicted RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 FAM47E-STBD1D6RA91 191 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 M0R2N6 131 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 AKAP3O75969 853 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 TMCC1O94876 653 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 LTFP02788 710 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 KRT7P08729 469 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 SETSIPP0DME0 302 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 GRM5P41594 1212 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 SCTRP47872 440 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 KCNQ1P51787 676 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 SPEM2Q0P670 501 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 ITGB3BPQ13352 177 aaPredicted RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 TUBB8Q3ZCM7 444 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 LRRC23Q53EV4 343 aaPredicted RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 FYB2Q5VWT5 728 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 IRGCQ6NXR0 463 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 VSTM1Q6UX27 236 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 ABHD15Q6UXT9 468 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 MMAAQ8IVH4 418 aaKnown RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 TXNDC5Q8NBS9 432 aaKnown RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 ZNF461Q8TAF7 563 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 DNAJC19Q96DA6 116 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 DRC3Q9H069 523 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 NSRP1Q9H0G5 558 aaKnown RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 RAB17Q9H0T7 212 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 LHX5Q9H2C1 402 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 RHBGQ9H310 441 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 WDR41Q9HAD4 459 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 TMEM165Q9HC07 324 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 SLC2A4RGQ9NR83 387 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 ABCC13Q9NSE7 274 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 INTS9Q9NV88 658 aaKnown RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 TSPAN16Q9UKR8 245 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 HEATR9A2RTY3 570 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 CLDN5O00501 218 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 MEIS2O14770 477 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 HADHAP40939 763 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 CASP2P42575 452 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 TRIP13Q15645 432 aaPredicted RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 ZC3H12AQ5D1E8 599 aaKnown RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 KDM7AQ6ZMT4 941 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 FAM126BQ8IXS8 530 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 TMEFF1Q8IYR6 380 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 BCAS3Q9H6U6 928 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 AGO3Q9H9G7 860 aaKnown RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 NT5MQ9NPB1 228 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 OSGEPQ9NPF4 335 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 DNAJB4Q9UDY4 337 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 TUBGCP4Q9UGJ1 667 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 STARD13Q9Y3M8 1113 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 ACACAQ13085 2346 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 PKD1L3Q7Z443 1732 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 ADAMTS7Q9UKP4 1686 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 PFDN1O60925 122 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 PPP1R11O60927 126 aaPredicted RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 ITGALP20701 1170 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 HSD17B3P37058 310 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 CTSOP43234 321 aaPredicted RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 YWHAZP63104 245 aaKnown RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 DR1Q01658 176 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 POU5F1BQ06416 359 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 SULT2A1Q06520 285 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 BBS9Q3SYG4 887 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 FBXO43Q4G163 708 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 TMEM119Q4V9L6 283 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 NXNQ6DKJ4 435 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 CRTC1Q6UUV9 634 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 TRIM72Q6ZMU5 477 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 RFX8Q6ZV50 586 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 UBALD2Q8IYN6 164 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 CFAP52Q8N1V2 620 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 LZTR1Q8N653 840 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 C1orf131Q8NDD1 294 aaKnown RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 ATXN2LQ8WWM7 1075 aaKnown RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 FAF2Q96CS3 445 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 CELF6Q96J87 481 aaKnown RBP6.7□□□□□ -1.34
NEDD9-202ENST00000379446 NUP85Q9BW27 656 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 RUBCNLQ9H714 662 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 CISHQ9NSE2 258 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 ABI3Q9P2A4 366 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 COL18A1P39060 1754 aa6.7□□□□□ -1.34
NEDD9-202ENST00000379446 TRIM43BA6NCK2 446 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 C2orf81A6NN90 581 aa6.69□□□□□ -1.34
NEDD9-202ENST00000379446 C9J4A7 227 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms