RNA–Protein interactions for RNA: ENST00000378792.1

CCL21-202, Transcript of C-C motif chemokine ligand 21, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CCL21, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21-202ENST00000378792 KLHL30Q0D2K2 578 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 CAMK2GQ13555 558 aaPredicted RBP11.15□□□□□ -0.62
CCL21-202ENST00000378792 ARID5BQ14865 1188 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 PLEKHG6Q3KR16 790 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 C5orf22Q49AR2 442 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 C2CD6Q53TS8 623 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 SYCP2LQ5T4T6 812 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 DCUN1D2Q6PH85 259 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 PRR23CQ6ZRP0 262 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 MON1BQ7L1V2 547 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 SETD3Q86TU7 594 aaPredicted RBP11.15□□□□□ -0.62
CCL21-202ENST00000378792 WFDC5Q8TCV5 224 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 CYB5D2Q8WUJ1 264 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 RXFP2Q8WXD0 754 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 RLN3Q8WXF3 142 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 SORCS1Q8WY21 1168 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 SYN2Q92777 582 aaPredicted RBP11.15□□□□□ -0.62
CCL21-202ENST00000378792 TRIM11Q96F44 468 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 LMLNQ96KR4 655 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 CFAP57Q96MR6 1250 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 PCDHB18PQ96TA0 734 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 TSPY26PQ9H489 355 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 ITM2CQ9NQX7 267 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 SLC25A13Q9UJS0 675 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 SCML1Q9UN30 329 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 INVSQ9Y283 1065 aa11.15□□□□□ -0.62
CCL21-202ENST00000378792 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.15□□□□□ -0.62
CCL21-202ENST00000378792 DMDP11532 3685 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 EP300Q09472 2414 aaPredicted RBP11.14□□□□□ -0.63
CCL21-202ENST00000378792 USP34Q70CQ2 3546 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 EDDM13A0A1B0GTR0 161 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 C2CD4BA6NLJ0 364 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 DRGXA6NNA5 263 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 DNTTP04053 509 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 TPM1P09493 284 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 PRKCHP24723 683 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 CD6P30203 668 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 AIF1P55008 147 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 ATP11AP98196 1134 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 PTP4A2Q12974 167 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 PUM1Q14671 1186 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCL21-202ENST00000378792 PTPRNQ16849 979 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 HNRNPA1L2Q32P51 320 aaKnown RBP11.14□□□□□ -0.63
CCL21-202ENST00000378792 TTC31Q49AM3 519 aaPredicted RBP11.14□□□□□ -0.63
CCL21-202ENST00000378792 AASDHQ4L235 1098 aaPredicted RBP11.14□□□□□ -0.63
CCL21-202ENST00000378792 FSCBQ5H9T9 825 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 PLA2G2CQ5R387 149 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 C6orf118Q5T5N4 469 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 OTUD1Q5VV17 481 aaPredicted RBP11.14□□□□□ -0.63
CCL21-202ENST00000378792 LYSMD4Q5XG99 296 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 ZNF783Q6ZMS7 281 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 BNIPLQ7Z465 357 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 MCOLN2Q8IZK6 566 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 EMC1Q8N766 993 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 CEP76Q8TAP6 659 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 NETO1Q8TDF5 533 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 MYEOVQ96EZ4 313 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 NCAPGQ9BPX3 1015 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 C2orf49Q9BVC5 232 aaPredicted RBP11.14□□□□□ -0.63
CCL21-202ENST00000378792 TTYH3Q9C0H2 523 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 PCED1AQ9H1Q7 454 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 HAUS4Q9H6D7 363 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 PARVAQ9NVD7 372 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 CDV3Q9UKY7 258 aaKnown RBP11.14□□□□□ -0.63
CCL21-202ENST00000378792 CYP8B1Q9UNU6 501 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 ERVW-1Q9UQF0 538 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 NCKAP1Q9Y2A7 1128 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 TBC1D30Q9Y2I9 924 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 LUC7L2Q9Y383 392 aaKnown RBP11.14□□□□□ -0.63
CCL21-202ENST00000378792 SPAG17Q6Q759 2223 aa11.14□□□□□ -0.63
CCL21-202ENST00000378792 ITIH6Q6UXX5 1313 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 VPS13AQ96RL7 3174 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 IGLV3-10A0A075B6K4 115 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 IGHV1OR15-9A0A0B4J2B8 117 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 E9PAM4 449 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 KHNYNO15037 678 aaKnown RBP11.13□□□□□ -0.63
CCL21-202ENST00000378792 RHOCP08134 193 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 MYBL1P10243 752 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 C7P10643 843 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 HLA-EP13747 358 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 TFE3P19532 575 aaPredicted RBP11.13□□□□□ -0.63
CCL21-202ENST00000378792 BCKDHBP21953 392 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 TGM1P22735 817 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 RFC1P35251 1148 aaPredicted RBP11.13□□□□□ -0.63
CCL21-202ENST00000378792 ADRA1BP35368 520 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 ETFBP38117 255 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 ZNF143P52747 638 aaPredicted RBP11.13□□□□□ -0.63
CCL21-202ENST00000378792 COPAP53621 1224 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 ZBED6P86452 979 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 NRG1Q02297 640 aaPredicted RBP11.13□□□□□ -0.63
CCL21-202ENST00000378792 TRIM14Q14142 442 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 CDO1Q16878 200 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 CCDC14Q49A88 953 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 TDRD12Q587J7 1177 aaKnown RBP11.13□□□□□ -0.63
CCL21-202ENST00000378792 WDR45BQ5MNZ6 344 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 ZNF776Q68DI1 518 aaPredicted RBP11.13□□□□□ -0.63
CCL21-202ENST00000378792 WDR59Q6PJI9 974 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 DSG4Q86SJ6 1040 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 FAM131BQ86XD5 332 aa11.13□□□□□ -0.63
CCL21-202ENST00000378792 SYT12Q8IV01 421 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms