RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 OVCA2Q8WZ82 227 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 BTN2A3PQ96KV6 586 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 MYRFLQ96LU7 910 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 CCDC77Q9BR77 488 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 SLC39A8Q9C0K1 460 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 IGSF9Q9P2J2 1179 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 LGALS13Q9UHV8 139 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 RABGEF1Q9UJ41 708 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 EXOC1LA0A1B0GW35 172 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 ZNF189O75820 626 aaPredicted RBP17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 FGF18O76093 207 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 IVLP07476 585 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 PPIGQ13427 754 aaKnown RBP eCLIP17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 AFMIDQ63HM1 303 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 TTC19Q6DKK2 380 aaPredicted RBP17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 C3orf62Q6ZUJ4 267 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 PDCD7Q8N8D1 485 aaKnown RBP17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 ZNF512Q96ME7 567 aaPredicted RBP17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 GORASP1Q9BQQ3 440 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 CAPS2Q9BXY5 557 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 MRPL17Q9NRX2 175 aaKnown RBP17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 SLC12A6Q9UHW9 1150 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 PCDHB12Q9Y5F1 795 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 WASH4PA8MWX3 477 aa17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 DFFAO00273 331 aa17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 TEX28O15482 410 aa17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 CSH1P0DML2 217 aa17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 CSH2P0DML3 217 aa17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 PPARDQ03181 441 aa17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 FPGSQ05932 587 aa17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 PALM2Q8IXS6 379 aa17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 LZTR1Q8N653 840 aa17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 PDZD8Q8NEN9 1154 aa17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 PRMT1Q99873 361 aaKnown RBP17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 ZBP1Q9H171 429 aa17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 EIF2B3Q9NR50 452 aaKnown RBP17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 KLHL8Q9P2G9 620 aaPredicted RBP17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 PLXNA4Q9HCM2 1894 aa17.8■□□□□ 0.44
THUMPD2-201ENST00000378727 IGLV3-10A0A075B6K4 115 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 FOXO6A8MYZ6 492 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 ZBTB24O43167 697 aaPredicted RBP17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 MTSS1O43312 755 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 CDH16O75309 829 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 TSHRP16473 764 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 CD68P34810 354 aaPredicted RBP17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 ALDH1A3P47895 512 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 KCNQ1P51787 676 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 ZNF33AQ06730 810 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 RAP1GAP2Q684P5 730 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 EXOC3L1Q86VI1 746 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 TCEAL8Q8IYN2 117 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 FIBCD1Q8N539 461 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 ARFGAP2Q8N6H7 521 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 TSGA13Q96PP4 275 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 STMN4Q9H169 189 aaPredicted RBP17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 NOL6Q9H6R4 1146 aaKnown RBP17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 PPARGC1AQ9UBK2 798 aaKnown RBP17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 ANAPC1Q9H1A4 1944 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 PRRG1O14668 218 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 CNTN5O94779 1100 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 PHBP35232 272 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 ATP5C1P36542 298 aaKnown RBP17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 COG7P83436 770 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 CDK16Q00536 496 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 GUCY1A3Q02108 690 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 TWF1Q12792 350 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 EFTUD2Q15029 972 aaKnown RBP eCLIP17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 TEX44Q53QW1 395 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 ALFQ53S48 1182 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 TMEM240Q5SV17 173 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 NADSYN1Q6IA69 706 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 FBXL22Q6P050 247 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 FBF1Q8TES7 1133 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 IGSF8Q969P0 613 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 TRMT2BQ96GJ1 504 aaKnown RBP17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 SIGLEC10Q96LC7 697 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 AGAP3Q96P47 875 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 CDK5RAP1Q96SZ6 601 aaKnown RBP17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 PLAC1Q9HBJ0 212 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 XAB2Q9HCS7 855 aaKnown RBP17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 FNIP2Q9P278 1114 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 TBK1Q9UHD2 729 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 DNMT3LQ9UJW3 386 aa17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 HBS1LQ9Y450 684 aaKnown RBP17.79■□□□□ 0.44
THUMPD2-201ENST00000378727 POC1B-GALNT4F8VUJ3 575 aa17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 COCHO43405 550 aa17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 MAFKO60675 156 aa17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 CCNCP24863 283 aa17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 PLD1Q13393 1074 aa17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 TDRPQ86YL5 185 aa17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 GPR65Q8IYL9 337 aa17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 MPP5Q8N3R9 675 aa17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 ATPAF2Q8N5M1 289 aa17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 CLP1Q92989 425 aaKnown RBP17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 MYEOVQ96EZ4 313 aa17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 ZNF419Q96HQ0 510 aaPredicted RBP17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 VAT1Q99536 393 aa17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 ZYG11BQ9C0D3 744 aa17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 MCOLN1Q9GZU1 580 aa17.78■□□□□ 0.44
THUMPD2-201ENST00000378727 ACSS3Q9H6R3 686 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms