RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 CD248Q9HCU0 757 aa22.79■■□□□ 1.24
SRM-201ENST00000376957 BZW2Q9Y6E2 419 aaKnown RBP22.79■■□□□ 1.24
SRM-201ENST00000376957 EP300Q09472 2414 aaPredicted RBP22.78■■□□□ 1.24
SRM-201ENST00000376957 BCLAF3A2AJT9 711 aaKnown RBP22.78■■□□□ 1.24
SRM-201ENST00000376957 SIGLEC16A6NMB1 481 aa22.78■■□□□ 1.24
SRM-201ENST00000376957 ADCY5O95622 1261 aa22.78■■□□□ 1.24
SRM-201ENST00000376957 BCKDHBP21953 392 aa22.78■■□□□ 1.24
SRM-201ENST00000376957 PTPN9P43378 593 aa22.78■■□□□ 1.24
SRM-201ENST00000376957 CAMK2GQ13555 558 aaPredicted RBP22.78■■□□□ 1.24
SRM-201ENST00000376957 CDO1Q16878 200 aa22.78■■□□□ 1.24
SRM-201ENST00000376957 AASDHQ4L235 1098 aaPredicted RBP22.78■■□□□ 1.24
SRM-201ENST00000376957 FSCBQ5H9T9 825 aa22.78■■□□□ 1.24
SRM-201ENST00000376957 DCUN1D2Q6PH85 259 aa22.78■■□□□ 1.24
SRM-201ENST00000376957 EMC1Q8N766 993 aa22.78■■□□□ 1.24
SRM-201ENST00000376957 FOXJ1Q92949 421 aa22.78■■□□□ 1.24
SRM-201ENST00000376957 MYEOVQ96EZ4 313 aa22.78■■□□□ 1.24
SRM-201ENST00000376957 CDV3Q9UKY7 258 aaKnown RBP22.78■■□□□ 1.24
SRM-201ENST00000376957 CYP8B1Q9UNU6 501 aa22.78■■□□□ 1.24
SRM-201ENST00000376957 THADAQ6YHU6 1953 aa22.78■■□□□ 1.24
SRM-201ENST00000376957 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 TFE3P19532 575 aaPredicted RBP22.77■■□□□ 1.24
SRM-201ENST00000376957 GPD1P21695 349 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 CD6P30203 668 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 PLK1P53350 603 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 ZBTB16Q05516 673 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 PTPRNQ16849 979 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 LYSMD4Q5XG99 296 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 MON1BQ7L1V2 547 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 RABEPKQ7Z6M1 372 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 PHLDB2Q86SQ0 1253 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 SETD3Q86TU7 594 aaPredicted RBP22.77■■□□□ 1.24
SRM-201ENST00000376957 FAM131BQ86XD5 332 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 TMEFF1Q8IYR6 380 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 LMLNQ96KR4 655 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 HAUS4Q9H6D7 363 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 ITM2CQ9NQX7 267 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 SLC25A13Q9UJS0 675 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 ERVW-1Q9UQF0 538 aa22.77■■□□□ 1.24
SRM-201ENST00000376957 A0A1W2PQJ5 194 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 C2CD4BA6NLJ0 364 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 CBFA2T2O43439 604 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 SRGAP2O75044 1071 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 ENDOD1O94919 500 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 DNTTP04053 509 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 HLA-EP13747 358 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 KRT83P78385 493 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 PTP4A2Q12974 167 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 PUM1Q14671 1186 aaKnown RBP eCLIP22.76■■□□□ 1.232e-6■■■■□ 25.8
SRM-201ENST00000376957 TTC31Q49AM3 519 aaPredicted RBP22.76■■□□□ 1.23
SRM-201ENST00000376957 C5orf22Q49AR2 442 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 SYCP2LQ5T4T6 812 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 C6orf118Q5T5N4 469 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 OTUD1Q5VV17 481 aaPredicted RBP22.76■■□□□ 1.23
SRM-201ENST00000376957 IGSF8Q969P0 613 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 TRIM11Q96F44 468 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 MKRN2Q9H000 416 aaKnown RBP22.76■■□□□ 1.23
SRM-201ENST00000376957 MUC3BQ9H195 1237 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 TSPY26PQ9H489 355 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 RETREG1Q9H6L5 497 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 PARD6AQ9NPB6 346 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 VPS28Q9UK41 221 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 SCML1Q9UN30 329 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.76■■□□□ 1.23
SRM-201ENST00000376957 PLXND1Q9Y4D7 1925 aa22.76■■□□□ 1.23
SRM-201ENST00000376957 IGHV1OR15-9A0A0B4J2B8 117 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 TARSL2A2RTX5 802 aaKnown RBP22.75■■□□□ 1.23
SRM-201ENST00000376957 KHNYNO15037 678 aaKnown RBP22.75■■□□□ 1.23
SRM-201ENST00000376957 GZMAP12544 262 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 TGM1P22735 817 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 RFC1P35251 1148 aaPredicted RBP22.75■■□□□ 1.23
SRM-201ENST00000376957 HOXD12P35452 270 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 PRKCIP41743 596 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 ARID5BQ14865 1188 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 HNRNPA1L2Q32P51 320 aaKnown RBP22.75■■□□□ 1.23
SRM-201ENST00000376957 CCDC14Q49A88 953 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 PLA2G2CQ5R387 149 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 ZNF776Q68DI1 518 aaPredicted RBP22.75■■□□□ 1.23
SRM-201ENST00000376957 BNIPLQ7Z465 357 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 CIR1Q86X95 450 aaPredicted RBP22.75■■□□□ 1.23
SRM-201ENST00000376957 SYT12Q8IV01 421 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 MCOLN2Q8IZK6 566 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 NETO1Q8TDF5 533 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 PIGKQ92643 395 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 SYN2Q92777 582 aaPredicted RBP22.75■■□□□ 1.23
SRM-201ENST00000376957 PRSS16Q9NQE7 514 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 PARVAQ9NVD7 372 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 USP36Q9P275 1121 aaKnown RBP22.75■■□□□ 1.23
SRM-201ENST00000376957 MBD1Q9UIS9 605 aaPredicted RBP22.75■■□□□ 1.23
SRM-201ENST00000376957 INTS6Q9UL03 887 aaKnown RBP22.75■■□□□ 1.23
SRM-201ENST00000376957 NCKAP1Q9Y2A7 1128 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 TBC1D30Q9Y2I9 924 aa22.75■■□□□ 1.23
SRM-201ENST00000376957 DMDP11532 3685 aa22.74■■□□□ 1.23
SRM-201ENST00000376957 EDDM13A0A1B0GTR0 161 aa22.74■■□□□ 1.23
SRM-201ENST00000376957 E9PAM4 449 aa22.74■■□□□ 1.23
SRM-201ENST00000376957 RHOCP08134 193 aa22.74■■□□□ 1.23
SRM-201ENST00000376957 OR1E1P30953 314 aa22.74■■□□□ 1.23
SRM-201ENST00000376957 COPAP53621 1224 aa22.74■■□□□ 1.23
SRM-201ENST00000376957 ZNF33AQ06730 810 aa22.74■■□□□ 1.23
SRM-201ENST00000376957 APCDD1Q8J025 514 aa22.74■■□□□ 1.23
SRM-201ENST00000376957 JOSD2Q8TAC2 188 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms