RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 IDH3BO43837 385 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 PLEKP08567 350 aaPredicted RBP12.7□□□□□ -0.38
VPS13A-204ENST00000376634 ITGA3P26006 1051 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 OR1E1P30953 314 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 PTAR1Q7Z6K3 402 aaPredicted RBP12.7□□□□□ -0.38
VPS13A-204ENST00000376634 EXOC3L1Q86VI1 746 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 SLC26A11Q86WA9 606 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 LRRC34Q8IZ02 419 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 SMARCD1Q96GM5 515 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 KCNF1Q9H3M0 494 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 TMEM138Q9NPI0 162 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 CELF2O95319 508 aaKnown RBP12.7□□□□□ -0.38
VPS13A-204ENST00000376634 ITGB6P18564 788 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 CASP4P49662 377 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 PRKAA2P54646 552 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 SPIDRQ14159 915 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 TSGA10IPQ3SY00 556 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 SPACA7Q96KW9 195 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 EHD3Q9NZN3 535 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 NDUFAF1Q9Y375 327 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 S100A6P06703 90 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 SAMD4BQ5PRF9 694 aaKnown RBP12.7□□□□□ -0.38
VPS13A-204ENST00000376634 GRTP1Q5TC63 336 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 DNAJC14Q6Y2X3 702 aaPredicted RBP12.7□□□□□ -0.38
VPS13A-204ENST00000376634 OR56A4Q8NGH8 313 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 MNTQ99583 582 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 NRDE2Q9H7Z3 1164 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 PHF11Q9UIL8 331 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 PRG2P13727 222 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 S100A1P23297 94 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 ACLYP53396 1101 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 R3HDM1Q15032 1099 aaKnown RBP12.7□□□□□ -0.38
VPS13A-204ENST00000376634 PRR5LQ6MZQ0 368 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 TSHZ1Q6ZSZ6 1077 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 SLC47A2Q86VL8 602 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 PROSER1Q86XN7 944 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 ITFG1Q8TB96 612 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 RABGEF1Q9UJ41 708 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 PRMT3O60678 531 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 BGNP21810 368 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 CD151P48509 253 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 BST2Q10589 180 aaKnown RBP12.7□□□□□ -0.38
VPS13A-204ENST00000376634 PPIL2Q13356 520 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 ZDHHC13Q8IUH4 622 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 ADHFE1Q8IWW8 467 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 UBP1Q9NZI7 540 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 GSTK1Q9Y2Q3 226 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 KIF1AQ12756 1690 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 SEC22BO75396 215 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 OR56A5P0C7T3 313 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 ARHGDIBP52566 201 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 MPZL3Q6UWV2 235 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 NOA1Q8NC60 698 aaKnown RBP12.7□□□□□ -0.38
VPS13A-204ENST00000376634 ARRDC4Q8NCT1 418 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 CMTM6Q9NX76 183 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 PTGES3LE9PB15 166 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 HHIPL2Q6UWX4 724 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 ERGIC2Q96RQ1 377 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 APOL2Q9BQE5 337 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 TAS2R13Q9NYV9 303 aa12.7□□□□□ -0.38
VPS13A-204ENST00000376634 TARBP1Q13395 1621 aaKnown RBP12.69□□□□□ -0.38
VPS13A-204ENST00000376634 DIDO1Q9BTC0 2240 aaKnown RBP12.69□□□□□ -0.38
VPS13A-204ENST00000376634 ACADLP28330 430 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 RBBP4Q09028 425 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 MGAT5Q09328 741 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 ZNHIT3Q15649 155 aaPredicted RBP12.69□□□□□ -0.38
VPS13A-204ENST00000376634 ULK3Q6PHR2 472 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 AP3S1Q92572 193 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 RNF145Q96MT1 663 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 SLC24A2Q9UI40 661 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 AP3M1Q9Y2T2 418 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 NEXMIFQ5QGS0 1516 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 OGTO15294 1046 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 MYL4P12829 197 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 RPL9P32969 192 aaKnown RBP12.69□□□□□ -0.38
VPS13A-204ENST00000376634 NFE2Q16621 373 aaPredicted RBP12.69□□□□□ -0.38
VPS13A-204ENST00000376634 TTC23Q5W5X9 447 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 SMYD1Q8NB12 490 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 VDRP11473 427 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 NPY2RP49146 381 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 ZNF621Q6ZSS3 439 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 RD3Q7Z3Z2 195 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 SEMA4DQ92854 862 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 CNTNAP5Q8WYK1 1306 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 SLC12A8A0AV02 714 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 RGS14O43566 566 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 RTN3O95197 1032 aaPredicted RBP12.69□□□□□ -0.38
VPS13A-204ENST00000376634 KCNH1O95259 989 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 SPANXN3Q5MJ09 141 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 N4BP2L1Q5TBK1 243 aaPredicted RBP12.69□□□□□ -0.38
VPS13A-204ENST00000376634 ZNF470Q6ECI4 717 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 R3HCC1LQ7Z5L2 792 aaKnown RBP12.69□□□□□ -0.38
VPS13A-204ENST00000376634 GPSM1Q86YR5 675 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 CATSPERZQ9NTU4 200 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 ZMYM5Q9UJ78 669 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 FAM92AA1XBS5 289 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 RAMP2O60895 175 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 RAB2AP61019 212 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 PAGE2BQ5JRK9 111 aa12.69□□□□□ -0.38
VPS13A-204ENST00000376634 IGDCC4Q8TDY8 1250 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms