RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 KYQ8NBH2 561 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 CATSPER2Q96P56 530 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 CCT7Q99832 543 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 NIFKQ9BYG3 293 aaKnown RBP13.89□□□□□ -0.19
C9orf47-203ENST00000375851 FAM105AQ9NUU6 356 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 ARMCX1Q9P291 453 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 PDE4DIPQ5VU43 2346 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 KDM1AO60341 852 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 PIAS1O75925 651 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 BAIAP3O94812 1187 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 NUDT17P0C025 328 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 CKBP12277 381 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 PBLDP30039 288 aaPredicted RBP13.89□□□□□ -0.19
C9orf47-203ENST00000375851 SERPINH1P50454 418 aaKnown RBP13.89□□□□□ -0.19
C9orf47-203ENST00000375851 RAP1GDS1P52306 607 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 FAM110CQ1W6H9 321 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 NOMO2Q5JPE7 1267 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 FOXR1Q6PIV2 292 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 GLT6D1Q7Z4J2 308 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 FAM9CQ8IZT9 166 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 CKAP2Q8WWK9 683 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 ACOX2Q99424 681 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 LGMNQ99538 433 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 CAAP1Q9H8G2 361 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 BTBD7Q9P203 1132 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 ADAMTS3O15072 1205 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 C4BPAP04003 597 aaKnown RBP13.89□□□□□ -0.19
C9orf47-203ENST00000375851 NFKB1P19838 968 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 PRKAA2P54646 552 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 POU5F2Q8N7G0 328 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 MYLPFQ96A32 169 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 MRPL45Q9BRJ2 306 aaKnown RBP13.89□□□□□ -0.19
C9orf47-203ENST00000375851 LHX5Q9H2C1 402 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 DPP7Q9UHL4 492 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 PTCH2Q9Y6C5 1203 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 DARSP14868 501 aaKnown RBP13.89□□□□□ -0.19
C9orf47-203ENST00000375851 HALP42357 657 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 CHRNB3Q05901 458 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 PLD1Q13393 1074 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 CAMK2GQ13555 558 aaPredicted RBP13.89□□□□□ -0.19
C9orf47-203ENST00000375851 TRMT5Q32P41 509 aaKnown RBP13.89□□□□□ -0.19
C9orf47-203ENST00000375851 RAP1GAP2Q684P5 730 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 UNC5AQ6ZN44 842 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 PALB2Q86YC2 1186 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 UROC1Q96N76 676 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 CRYL1Q9Y2S2 319 aa13.89□□□□□ -0.19
C9orf47-203ENST00000375851 GUCA1CO95843 209 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 ALOX15P16050 662 aaPredicted RBP13.88□□□□□ -0.19
C9orf47-203ENST00000375851 MRPS5P82675 430 aaKnown RBP13.88□□□□□ -0.19
C9orf47-203ENST00000375851 TBL3Q12788 808 aaKnown RBP13.88□□□□□ -0.19
C9orf47-203ENST00000375851 LRRN4Q8WUT4 740 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 UXTQ9UBK9 157 aaPredicted RBP13.88□□□□□ -0.19
C9orf47-203ENST00000375851 APPL1Q9UKG1 709 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 SMIM35A0A1B0GVV1 85 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 BTBD19C9JJ37 291 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 XPO1O14980 1071 aaKnown RBP13.88□□□□□ -0.19
C9orf47-203ENST00000375851 RNASEH1O60930 286 aaKnown RBP13.88□□□□□ -0.19
C9orf47-203ENST00000375851 CBX6O95503 412 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 ATP6V1B1P15313 513 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 EPB42P16452 691 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 ARL2P36404 184 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 DSG1Q02413 1049 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 PCID2Q5JVF3 399 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 PLEKHA7Q6IQ23 1121 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 TSHZ1Q6ZSZ6 1077 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 C16orf59Q7L2K0 433 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 P3H2Q8IVL5 708 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 CERS2Q96G23 380 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 PPP1R10Q96QC0 940 aaKnown RBP13.88□□□□□ -0.19
C9orf47-203ENST00000375851 CPXM1Q96SM3 734 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 GIMAP4Q9NUV9 329 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 GIT1Q9Y2X7 761 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 ACTL7BQ9Y614 415 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 FAM95CA0A1B0GW59 222 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 HNRNPRO43390 633 aaKnown RBP13.88□□□□□ -0.19
C9orf47-203ENST00000375851 BANF1O75531 89 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 ABHD2P08910 425 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
C9orf47-203ENST00000375851 MAPK1P28482 360 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 ICAM3P32942 547 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 IKBKEQ14164 716 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 HOMEZQ8IX15 550 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 TMEM237Q96Q45 408 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 B3GNT5Q9BYG0 378 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 TTYH3Q9C0H2 523 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 HSD3B7Q9H2F3 369 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 CNGB3Q9NQW8 809 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 VTI1BQ9UEU0 232 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 KNDC1Q76NI1 1749 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 SF3B1O75533 1304 aaKnown RBP eCLIP13.88□□□□□ -0.19
C9orf47-203ENST00000375851 CYP1A1P04798 512 aaPredicted RBP13.88□□□□□ -0.19
C9orf47-203ENST00000375851 CCNB1P14635 433 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 ARL4DP49703 201 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 FBXW4P57775 412 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 C9orf57Q5W0N0 161 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 CENPTQ96BT3 561 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 DUSP16Q9BY84 665 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 SENP6Q9GZR1 1112 aaPredicted RBP13.88□□□□□ -0.19
C9orf47-203ENST00000375851 RMND5AQ9H871 391 aa13.88□□□□□ -0.19
C9orf47-203ENST00000375851 MID1IP1Q9NPA3 183 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms