RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 DNAJA2O60884 412 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 BEST1O76090 585 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 YEATS4O95619 227 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 STAMBPO95630 424 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 A1BGP04217 495 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 HNRNPCL4P0DMR1 293 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 RARBP10826 455 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 ALAS1P13196 640 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 RFC1P35251 1148 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 MATR3P43243 847 aaKnown RBP eCLIP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 MTIF2P46199 727 aaKnown RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CCR9P51686 369 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 INAQ16352 499 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 HLFQ16534 295 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 FSCN1Q16658 493 aaKnown RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CCDC40Q4G0X9 1142 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 PAN2Q504Q3 1202 aaKnown RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CPZQ66K79 652 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CYP20A1Q6UW02 462 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 PET117Q6UWS5 81 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 RPTNQ6XPR3 784 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 FAM83HQ6ZRV2 1179 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 RAB11FIP2Q7L804 512 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 TMC6Q7Z403 805 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 METTL23Q86XA0 190 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 SCN4BQ8IWT1 228 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 TXLNBQ8N3L3 684 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 KCTD6Q8NC69 237 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 PLBD2Q8NHP8 589 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 UHMK1Q8TAS1 419 aaKnown RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 HDAC10Q969S8 669 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 MTFMTQ96DP5 389 aaKnown RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 NEIL1Q96FI4 390 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 C1orf159Q96HA4 380 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 RUNDC3BQ96NL0 473 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 MXD3Q9BW11 206 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 SSBP3Q9BWW4 388 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 GPR63Q9BZJ6 419 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 ACAD9Q9H845 621 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 LIN28AQ9H9Z2 209 aaKnown RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 TM9SF3Q9HD45 589 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 PFDN4Q9NQP4 134 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 NECTIN3Q9NQS3 549 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 ERVK13-1Q9NX77 482 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 ACTR3BQ9P1U1 418 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 MUTYHQ9UIF7 546 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CYP46A1Q9Y6A2 500 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CDK5RAP2Q96SN8 1893 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CTAGE9A4FU28 777 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 EPOPA6NHQ4 379 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CHURC1-FNTBB4DL54 471 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 H0Y858 1186 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 SEPT4O43236 478 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 SIGLEC6O43699 453 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 KERAO60938 352 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CLEC3AO75596 197 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 ERAL1O75616 437 aaKnown RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 UBOX5O94941 541 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CCNDBP1O95273 360 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 TK1P04183 234 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 ALDH2P05091 517 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 MMEP08473 750 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CSF1P09603 554 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 HSPA5P11021 654 aaKnown RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 TOP1P11387 765 aaKnown RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CKBP12277 381 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 SKILP12757 684 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 TYRP14679 529 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 MAGEA8P43361 318 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 AARSP49588 968 aaKnown RBP eCLIP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 COG7P83436 770 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CCDC15Q0P6D6 951 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 AIMP1Q12904 312 aaKnown RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 LRMPQ12912 555 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CUL4BQ13620 913 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 SPIDRQ14159 915 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CNGA2Q16280 664 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 RABL6Q3YEC7 729 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 PLEKHS1Q5SXH7 462 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 DEPDC1Q5TB30 811 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 KLHDC7AQ5VTJ3 777 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 MBNL2Q5VZF2 373 aaKnown RBP2.41□□□□□ -2.02
CCDC7-204ENST00000375025 TPGS2Q68CL5 300 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 KRT80Q6KB66 452 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 WDR93Q6P2C0 686 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 PPP1R21Q6ZMI0 780 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CHST3Q7LGC8 479 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 ZNF804AQ7Z570 1209 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 MON1AQ86VX9 555 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 TMEM200AQ86VY9 491 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CEP97Q8IW35 865 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 SIRT2Q8IXJ6 389 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 TMEM105Q8N8V8 129 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 ANKRD53Q8N9V6 530 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 TMEM145Q8NBT3 493 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 SPATA20Q8TB22 786 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 ZNF384Q8TF68 577 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 WASF1Q92558 559 aa2.41□□□□□ -2.02
CCDC7-204ENST00000375025 CUL5Q93034 780 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms