RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 FAM153BP0C7A2 387 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 ME2P23368 584 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 PIK3R1P27986 724 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 CDK16Q00536 496 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 C1QBPQ07021 282 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 ITGA9Q13797 1035 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 AMHR2Q16671 573 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 FAM153CQ494X1 144 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 TREML2Q5T2D2 321 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 PDZK1Q5T2W1 519 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 GPR142Q7Z601 462 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 SLC9A9Q8IVB4 645 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 EID3Q8N140 333 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 SETD9Q8NE22 299 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 PURBQ96QR8 312 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 NOL6Q9H6R4 1146 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 NRDE2Q9H7Z3 1164 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 NMRK2Q9NPI5 230 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 AAASQ9NRG9 546 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 VAV3Q9UKW4 847 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 REXO2Q9Y3B8 237 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 MYH14Q7Z406 1995 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 NUP98P52948 1817 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 NRCAMQ92823 1304 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 A0A087WXM4 84 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 GPC1P35052 558 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 IL12RB1P42701 662 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 DGKZQ13574 1117 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 MRPL48Q96GC5 212 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 SRPK1Q96SB4 655 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 SERHL2Q9H4I8 314 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 SERHLQ9NQF3 203 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 BARX2Q9UMQ3 279 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 ATRNL1Q5VV63 1379 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 GLRA2P23416 452 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 CASP5P51878 434 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 COX10Q12887 443 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 MAP2K5Q13163 448 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 DCTN2Q13561 401 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 MAPK11Q15759 364 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 OTUD3Q5T2D3 398 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 RPRD1AQ96P16 312 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 REXO4Q9GZR2 422 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 CLEC4MQ9H2X3 399 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 KLHL31Q9H511 634 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 STK39Q9UEW8 545 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 MAGEB16A2A368 324 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 USP2O75604 605 aaPredicted RBP12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 ATG7O95352 703 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 CBX6O95503 412 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 CPSF4O95639 269 aaKnown RBP12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 ELK3P41970 407 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 IFI35P80217 286 aaPredicted RBP12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 LBX2Q6XYB7 198 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 LRRC55Q6ZSA7 311 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 CROCCP3Q8IVE0 287 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 C9orf16Q9BUW7 83 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 NINJ2Q9NZG7 142 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 TPRKBQ9Y3C4 175 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 MGAT4DA6NG13 374 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 STK25O00506 426 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 FBXO21O94952 628 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 MFN2O95140 757 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 DMPKQ09013 629 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 TYW3Q6IPR3 259 aaKnown RBP12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 TMEM161BQ8NDZ6 487 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 APOL4Q9BPW4 351 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 FICDQ9BVA6 458 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 HDHD2Q9H0R4 259 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 VANGL2Q9ULK5 521 aa12.52□□□□□ -0.4
NPLOC4-202ENST00000374747 INPP4BO15327 924 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 ALADP13716 330 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 GP5P40197 560 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 SKIV2L2P42285 1042 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 ARL4DP49703 201 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 ORC1Q13415 861 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 NR6A1Q15406 480 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 MEA1Q16626 185 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 BMT2Q1RMZ1 405 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 FAM117BQ6P1L5 589 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 FOXR1Q6PIV2 292 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 AMIGO3Q86WK7 504 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 ARHGEF19Q8IW93 802 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 FAM45AQ8TCE6 357 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 HDAC7Q8WUI4 952 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 ZNF75CPQ92670 426 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 TMEM169Q96HH4 297 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 CLPBQ9H078 707 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 DMAP1Q9NPF5 467 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 MCM8Q9UJA3 840 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 KLHL20Q9Y2M5 609 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 PSMG1O95456 288 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 GSTM1P09488 218 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 ACO1P21399 889 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 ZNF177Q13360 481 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 FASTKQ14296 549 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 GRTP1Q5TC63 336 aa12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 YTHDF3Q7Z739 585 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-202ENST00000374747 CCDC33Q8N5R6 958 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms