RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 SLC27A1Q6PCB7 646 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 EPGNQ6UW88 154 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 FBXW8Q8N3Y1 598 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 SLC25A41Q8N5S1 370 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 CLEC4CQ8WTT0 213 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 STON2Q8WXE9 905 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 RBBP8Q99708 897 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 CENPKQ9BS16 269 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 RTKNQ9BST9 563 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 KATNBL1Q9H079 304 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 SNX15Q9NRS6 342 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 SYBUQ9NX95 663 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 MID2Q9UJV3 735 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.37■□□□□ 0.53
PHF1-201ENST00000374512 CASQ2O14958 399 aaPredicted RBP18.37■□□□□ 0.53
PHF1-201ENST00000374512 MAP3K13O43283 966 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 MFSD11O43934 449 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 SNUPNO95149 360 aaKnown RBP18.37■□□□□ 0.53
PHF1-201ENST00000374512 LCP1P13796 627 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 MED21Q13503 144 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 KIZQ2M2Z5 673 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 RALGPS1Q5JS13 557 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 AP1ARQ63HQ0 302 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 SDCCAG8Q86SQ7 713 aaPredicted RBP18.37■□□□□ 0.53
PHF1-201ENST00000374512 ST13P4Q8IZP2 240 aaPredicted RBP18.37■□□□□ 0.53
PHF1-201ENST00000374512 NME8Q8N427 588 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 POU5F2Q8N7G0 328 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 C7orf31Q8N865 590 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 SLC26A7Q8TE54 656 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 PGBD4Q96DM1 585 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 CXCL16Q9H2A7 254 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 TUBGCP4Q9UGJ1 667 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 POMPQ9Y244 141 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 RPS6KL1Q9Y6S9 549 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 UQCRBP14927 111 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 LIMK2P53671 638 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 ITGA9Q13797 1035 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 CFAP157Q5JU67 520 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 RAPH1Q70E73 1250 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 PDZD4Q76G19 769 aaPredicted RBP18.37■□□□□ 0.53
PHF1-201ENST00000374512 RNF139Q8WU17 664 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 BTBD9Q96Q07 612 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 TRIM4Q9C037 500 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 CDH19Q9H159 772 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 PIDD1Q9HB75 910 aa18.37■□□□□ 0.53
PHF1-201ENST00000374512 MAGEB16A2A368 324 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 GLTPD2A6NH11 291 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 ERI2A8K979 691 aaKnown RBP18.36■□□□□ 0.53
PHF1-201ENST00000374512 SLC22A2O15244 555 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 USP1O94782 785 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 MMP3P08254 477 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 COX4I1P13073 169 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 NCF2P19878 526 aaPredicted RBP18.36■□□□□ 0.53
PHF1-201ENST00000374512 ITGAXP20702 1163 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 PSMB4P28070 264 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 HOXA11P31270 313 aaPredicted RBP18.36■□□□□ 0.53
PHF1-201ENST00000374512 HADHAP40939 763 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 NUMBP49757 651 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 MTTPP55157 894 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 SH3BGRP55822 239 aaPredicted RBP18.36■□□□□ 0.53
PHF1-201ENST00000374512 TMEM135Q86UB9 458 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 PYDC1Q8WXC3 89 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 NT5C3BQ969T7 300 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 TUBGCP5Q96RT8 1024 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 MAGEB5Q9BZ81 275 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 SLC17A6Q9P2U8 582 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 GINS2Q9Y248 185 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 TBC1D30Q9Y2I9 924 aa18.36■□□□□ 0.53
PHF1-201ENST00000374512 IQCA1LA6NCM1 817 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 BTBD19C9JJ37 291 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 DAB1O75553 588 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 SNAI1O95863 264 aaPredicted RBP18.35■□□□□ 0.53
PHF1-201ENST00000374512 APOA4P06727 396 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 GNL1P36915 607 aaPredicted RBP18.35■□□□□ 0.53
PHF1-201ENST00000374512 SULT1E1P49888 294 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 PRKAA2P54646 552 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 EPHB1P54762 984 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 AIF1P55008 147 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 CDC42EP1Q00587 391 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 PCBP1Q15365 356 aaKnown RBP eCLIP18.35■□□□□ 0.531e-8■■■■■ 29.6
PHF1-201ENST00000374512 PPM1JQ5JR12 505 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 C9orf57Q5W0N0 161 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 CATSPER4Q7RTX7 472 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 BNIPLQ7Z465 357 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 DEFB107AQ8IZN7 70 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 ZNF567Q8N184 647 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 PYROXD2Q8N2H3 581 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 DCLK2Q8N568 766 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.35■□□□□ 0.53
PHF1-201ENST00000374512 AZIN2Q96A70 460 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 MS4A4AQ96JQ5 239 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 TSPAN18Q96SJ8 248 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 ADAMTS10Q9H324 1103 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 DPEP3Q9H4B8 488 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 EBF3Q9H4W6 596 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 COG4Q9H9E3 785 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 BFARQ9NZS9 450 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 PRPF19Q9UMS4 504 aaKnown RBP18.35■□□□□ 0.53
PHF1-201ENST00000374512 MFHAS1Q9Y4C4 1052 aa18.35■□□□□ 0.53
PHF1-201ENST00000374512 SLC4A7Q9Y6M7 1214 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms